Conservation of cofitness between b0419 and b0715 in Escherichia coli BW25113

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0419 yajO putative NAD(P)H-dependent xylose reductase (VIMSS) 1.0 b0715 abrB putative transport protein (VIMSS) 0.23 16
Escherichia coli ECRC99 1.00 KEDOAH_19540 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 KEDOAH_20980 abrB Putative regulator AbrB — —
Escherichia coli ECRC102 1.00 NIAGMN_06480 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 NIAGMN_05040 abrB Putative regulator AbrB — —
Escherichia coli ECRC98 1.00 JDDGAC_12080 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 JDDGAC_10640 abrB Putative regulator AbrB — —
Escherichia coli ECRC101 1.00 MCAODC_27650 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 MCAODC_26205 abrB Putative regulator AbrB — —
Escherichia coli ECRC101 1.00 OKFHMN_08425 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 OKFHMN_06985 abrB Putative regulator AbrB — —
Escherichia coli ECRC62 1.00 BNILDI_22790 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 BNILDI_21365 abrB Putative regulator AbrB — —
Escherichia fergusonii Becca 1.00 EFB2_03638 1-deoxyxylulose-5-phosphate synthase YajO 0.99 EFB2_03388 hypothetical protein low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02530 1-deoxyxylulose-5-phosphate synthase YajO 0.99 ECOLIN_RS03825 AbrB family transcriptional regulator — —
Escherichia coli BL21 1.00 ECD_00367 2-carboxybenzaldehyde reductase 0.99 ECD_00675 regulator of aidB expression; inner membrane protein low > 60
Escherichia coli ECOR38 0.99 HEPCGN_07055 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 HEPCGN_01225 abrB Putative regulator AbrB low > 85
Escherichia coli ECOR27 0.99 NOLOHH_01375 yajO 1-deoxyxylulose-5-phosphate synthase YajO 0.99 NOLOHH_23370 abrB Putative regulator AbrB 0.58 44
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03257 Aldo-keto reductase IolS 0.99 OHPLBJKB_03002 hypothetical protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4323 FIG00553873: hypothetical protein 0.74 GFF4633 Putative transport protein low > 78
Klebsiella michiganensis M5al 0.86 BWI76_RS06375 oxidoreductase 0.63 BWI76_RS12490 AbrB family transcriptional regulator low > 92
Serratia liquefaciens MT49 0.75 IAI46_04920 aldo/keto reductase 0.57 IAI46_00750 AbrB family transcriptional regulator low > 86
Pantoea sp. MT58 0.74 IAI47_14745 aldo/keto reductase 0.52 IAI47_18380 AbrB family transcriptional regulator low > 76
Rahnella sp. WP5 0.72 EX31_RS22150 aldo/keto reductase 0.54 EX31_RS15190 AbrB family transcriptional regulator low > 89
Rhizobium sp. OAE497 0.64 ABIE40_RS17415 aldo/keto reductase 0.36 ABIE40_RS11630 AbrB family transcriptional regulator low > 107
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS26360 alcohol dehydrogenase 0.14 RR42_RS20605 membrane protein low > 128
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1790 Aldo/keto reductase 0.36 Psyr_3112 Putative ammonia monooxygenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1790 Aldo/keto reductase 0.36 Psyr_3112 Putative ammonia monooxygenase low > 86
Variovorax sp. OAS795 0.33 ABID97_RS16250 aldo/keto reductase 0.08 ABID97_RS00085 AbrB family transcriptional regulator low > 91
Sinorhizobium meliloti 1021 0.33 SMc04056 oxidoreductase 0.40 SMc01415 transmembrane protein low > 103
Agrobacterium fabrum C58 0.33 Atu5198 putative oxidoreductase 0.11 Atu0200 hypothetical protein low > 89
Variovorax sp. SCN45 0.32 GFF5808 Putative oxidoreductase 0.10 GFF3797 Ammonia monooxygenase low > 127
Azospirillum sp. SherDot2 0.31 MPMX19_05431 1-deoxyxylulose-5-phosphate synthase YajO 0.43 MPMX19_05318 hypothetical protein low > 112
Bosea sp. OAE506 0.30 ABIE41_RS12360 aldo/keto reductase 0.10 ABIE41_RS04375 AbrB family transcriptional regulator low > 77
Pseudomonas fluorescens SBW25 0.28 PFLU_RS19605 aldo/keto reductase 0.08 PFLU_RS07135 AbrB family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS19605 aldo/keto reductase 0.08 PFLU_RS07135 AbrB family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_5001 Oxidoreductase, aldo/keto reductase family 0.09 Pf1N1B4_3310 Ammonia monooxygenase — —
Dickeya dadantii 3937 0.27 DDA3937_RS15250 aldo/keto reductase 0.52 DDA3937_RS19870 AbrB family transcriptional regulator low > 74
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_26915 NADP-dependent oxidoreductase 0.08 AO353_17565 hypothetical protein low > 101
Dickeya dianthicola ME23 0.27 DZA65_RS16150 aldo/keto reductase 0.53 DZA65_RS21065 AbrB family transcriptional regulator low > 75
Pseudomonas sp. RS175 0.27 PFR28_02472 1-deoxyxylulose-5-phosphate synthase YajO 0.09 PFR28_00678 hypothetical protein low > 88
Dickeya dianthicola 67-19 0.27 HGI48_RS15330 aldo/keto reductase 0.51 HGI48_RS20025 AbrB family transcriptional regulator low > 71
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2937 Oxidoreductase, aldo/keto reductase family 0.10 PfGW456L13_4529 Ammonia monooxygenase low > 87
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_459 Oxidoreductase, aldo/keto reductase family 0.29 Pf6N2E2_1913 Putative transport protein low > 103
Pseudomonas simiae WCS417 0.26 PS417_13995 NADP-dependent oxidoreductase 0.08 PS417_07060 membrane protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_22855 NADP-dependent oxidoreductase 0.33 AO356_30250 hypothetical protein low > 104
Pectobacterium carotovorum WPP14 0.26 HER17_RS06335 aldo/keto reductase 0.52 HER17_RS01375 AbrB family transcriptional regulator low > 75
Rhodospirillum rubrum S1H 0.23 Rru_A1059 Aldo/keto reductase (NCBI) 0.42 Rru_A3334 Putative ammonia monooxygenase (NCBI) low > 58

Not shown: 37 genomes with orthologs for b0419 only; 1 genomes with orthologs for b0715 only