Conservation of cofitness between b3617 and b0237 in Escherichia coli BW25113

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3617 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) 1.0 b0237 pepD aminoacyl-histidine dipeptidase (peptidase D) (NCBI) 0.38 7
Escherichia coli ECRC98 1.00 JDDGAC_19335 kbl glycine C-acetyltransferase 0.99 JDDGAC_13325 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC102 1.00 NIAGMN_13470 kbl glycine C-acetyltransferase 0.99 NIAGMN_07560 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC99 1.00 KEDOAH_12440 kbl glycine C-acetyltransferase 0.99 KEDOAH_18455 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECOR27 1.00 NOLOHH_07590 kbl glycine C-acetyltransferase 1.00 NOLOHH_02075 pepD cytosol nonspecific dipeptidase low > 57
Escherichia coli ECRC101 1.00 MCAODC_06220 kbl glycine C-acetyltransferase 0.99 MCAODC_00220 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC101 1.00 OKFHMN_15710 kbl glycine C-acetyltransferase 0.99 OKFHMN_09700 pepD cytosol nonspecific dipeptidase — —
Escherichia coli ECRC62 1.00 BNILDI_03925 kbl glycine C-acetyltransferase 1.00 BNILDI_00270 pepD cytosol nonspecific dipeptidase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20640 glycine C-acetyltransferase 0.99 ECOLIN_RS01800 cytosol nonspecific dipeptidase low > 52
Escherichia coli BL21 1.00 ECD_03475 glycine C-acetyltransferase 0.99 ECD_00232 aminoacyl-histidine dipeptidase (peptidase D) low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00082 2-amino-3-ketobutyrate coenzyme A ligase 1.00 OHPLBJKB_03403 Cytosol non-specific dipeptidase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_14550 kbl glycine C-acetyltransferase 0.99 HEPCGN_07805 pepD cytosol nonspecific dipeptidase low > 85
Escherichia fergusonii Becca 0.99 EFB2_00193 2-amino-3-ketobutyrate coenzyme A ligase 0.99 EFB2_03783 Cytosol non-specific dipeptidase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF393 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.93 GFF4108 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3870 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 0.89 EX28DRAFT_2656 Xaa-His dipeptidase low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_00115 2-amino-3-ketobutyrate coenzyme A ligase 0.88 MPMX20_00922 Cytosol non-specific dipeptidase 0.26 68
Klebsiella michiganensis M5al 0.94 BWI76_RS27255 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.93 BWI76_RS05540 cytosol nonspecific dipeptidase 0.26 9
Serratia liquefaciens MT49 0.88 IAI46_24730 glycine C-acetyltransferase 0.78 IAI46_04410 beta-Ala-His dipeptidase 0.55 59
Rahnella sp. WP5 0.85 EX31_RS14390 glycine C-acetyltransferase 0.75 EX31_RS21000 beta-Ala-His dipeptidase low > 89
Pantoea sp. MT58 0.83 IAI47_00695 glycine C-acetyltransferase 0.80 IAI47_15145 beta-Ala-His dipeptidase low > 76
Pectobacterium carotovorum WPP14 0.81 HER17_RS20765 glycine C-acetyltransferase 0.78 HER17_RS04675 beta-Ala-His dipeptidase low > 75
Shewanella amazonensis SB2B 0.78 Sama_0098 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.63 Sama_2519 Xaa-His dipeptidase (RefSeq) low > 62
Dickeya dadantii 3937 0.77 DDA3937_RS20435 glycine C-acetyltransferase 0.79 DDA3937_RS16570 beta-Ala-His dipeptidase low > 74
Shewanella loihica PV-4 0.77 Shew_3709 2-amino-3-ketobutyrate coenzyme A ligase (RefSeq) 0.61 Shew_2852 aminoacyl-histidine dipeptidase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.76 SO4674 kbl 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.61 SO1115 pepD dipeptidase (EC 3.4.13.-) (from data) low > 76
Shewanella sp. ANA-3 0.76 Shewana3_4104 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) 0.61 Shewana3_0950 M20C family Xaa-His dipeptidase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_18570 glycine C-acetyltransferase 0.65 CSW01_11600 aminoacyl-histidine dipeptidase low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_15955 glycine C-acetyltransferase 0.42 CA264_03200 aminoacyl-histidine dipeptidase low > 74
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS09505 glycine C-acetyltransferase 0.46 HMPREF1078_RS04870 aminoacyl-histidine dipeptidase low > 61
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS10455 glycine C-acetyltransferase 0.42 HMPREF1058_RS14140 aminoacyl-histidine dipeptidase low > 67
Bacteroides stercoris CC31F 0.60 HMPREF1181_RS10950 glycine C-acetyltransferase 0.47 HMPREF1181_RS09110 aminoacyl-histidine dipeptidase low > 56
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS06660 glycine C-acetyltransferase 0.43 ABI39_RS09790 aminoacyl-histidine dipeptidase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.59 BT1371 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) 0.46 BT1615 aminoacyl-histidine dipeptidase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.59 BACOVA_00211 glycine C-acetyltransferase 0.46 BACOVA_04354 Xaa-His dipeptidase low > 94

Not shown: 39 genomes with orthologs for b3617 only; 5 genomes with orthologs for b0237 only