Conservation of cofitness between b2221 and b0101 in Escherichia coli BW25113

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2221 atoD acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) 1.0 b0101 yacG zinc-binding protein (NCBI) 0.30 1
Escherichia coli BL21 1.00 ECD_02148 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 1.00 ECD_00101 DNA gyrase inhibitor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01489 Acetate CoA-transferase subunit alpha 1.00 OHPLBJKB_03559 DNA gyrase inhibitor YacG — —
Escherichia fergusonii Becca 0.99 EFB2_01634 Acetate CoA-transferase subunit alpha 1.00 EFB2_03947 DNA gyrase inhibitor YacG — —
Escherichia coli ECOR38 0.99 HEPCGN_22425 atoD acetate CoA-transferase subunit alpha 1.00 HEPCGN_08550 yacG DNA gyrase inhibitor YacG — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12970 acetate CoA-transferase subunit alpha 0.99 ECOLIN_RS00545 DNA gyrase inhibitor YacG — —
Acinetobacter radioresistens SK82 0.45 MPMX26_00627 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.45 MPMX26_00298 DNA gyrase inhibitor YacG — —
Shewanella oneidensis MR-1 0.45 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) 0.46 SO0411 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.45 Shewana3_0414 hypothetical protein (RefSeq) — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS21415 3-oxoadipate CoA-transferase subunit A 0.45 BPHYT_RS17170 hypothetical protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_01597 3-oxoadipate CoA-transferase alpha subunit 0.45 H281DRAFT_06252 hypothetical protein — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS18090 3-oxoacid CoA-transferase subunit A 0.45 QEN71_RS27330 DNA gyrase inhibitor YacG low > 153
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS15800 3-oxoacid CoA-transferase subunit A 0.47 ABZR87_RS01870 DNA gyrase inhibitor YacG low > 80
Klebsiella michiganensis M5al 0.41 BWI76_RS16145 3-oxoadipate CoA-transferase 0.84 BWI76_RS04810 DNA gyrase inhibitor YacG — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1708 3-oxoacid CoA-transferase, A subunit 0.85 EX28DRAFT_3695 Uncharacterized protein conserved in bacteria — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS10585 CoA transferase subunit A 0.52 PFLU_RS03930 DNA gyrase inhibitor YacG low > 109
Pseudomonas simiae WCS417 0.40 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase 0.52 PS417_03885 DNA gyrase inhibitor — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS10585 CoA transferase subunit A 0.52 PFLU_RS03930 DNA gyrase inhibitor YacG low > 109
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) 0.53 Pf6N2E2_5138 FIG003276: zinc-binding protein — —
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase 0.55 AO356_15995 DNA gyrase inhibitor — —
Paraburkholderia graminis OAS925 0.40 ABIE53_004277 3-oxoadipate CoA-transferase alpha subunit 0.45 ABIE53_003599 endogenous inhibitor of DNA gyrase (YacG/DUF329 family) low > 113
Escherichia coli ECRC62 0.39 BNILDI_17475 atoD succinyl-CoA--3-ketoacid-CoA transferase 1.00 BNILDI_08695 yacG DNA gyrase inhibitor YacG — —
Escherichia coli ECOR27 0.39 NOLOHH_18990 atoD succinyl-CoA--3-ketoacid-CoA transferase 1.00 NOLOHH_02915 yacG DNA gyrase inhibitor YacG — —
Enterobacter sp. TBS_079 0.39 MPMX20_01912 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.83 MPMX20_00793 DNA gyrase inhibitor YacG low > 85
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase 0.53 AO353_14310 DNA gyrase inhibitor — —
Serratia liquefaciens MT49 0.39 IAI46_16155 3-oxoacid CoA-transferase subunit A 0.77 IAI46_03495 DNA gyrase inhibitor YacG — —

Not shown: 41 genomes with orthologs for b2221 only; 16 genomes with orthologs for b0101 only