Conservation of cofitness between SMa2355 and SMa1236 in Sinorhizobium meliloti 1021

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMa2355 DNA polymerase IV 1.0 SMa1236 nitrate reductase catalytic subunit 0.32 13
Agrobacterium fabrum C58 0.66 Atu5469 DNA polymerase IV 0.88 Atu4408 nitrate reductase catalytic subunit low > 89
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS12255 DNA polymerase IV 0.75 ABZR86_RS16025 periplasmic nitrate reductase subunit alpha low > 74
Lysobacter sp. OAE881 0.39 ABIE51_RS08465 DNA polymerase IV 0.76 ABIE51_RS17015 periplasmic nitrate reductase subunit alpha low > 62
Pectobacterium carotovorum WPP14 0.38 HER17_RS04670 DNA polymerase IV 0.67 HER17_RS09095 nitrate reductase catalytic subunit NapA low > 75
Shewanella amazonensis SB2B 0.37 Sama_2527 DNA polymerase IV (RefSeq) 0.74 Sama_1622 nitrate reductase catalytic subunit (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_2974 DNA polymerase IV (EC 2.7.7.7) 0.70 Pf6N2E2_1597 Periplasmic nitrate reductase precursor (EC 1.7.99.4) low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF4104 DNA polymerase IV (EC 2.7.7.7) 0.67 GFF1821 Periplasmic nitrate reductase precursor (EC 1.7.99.4) low > 78
Escherichia coli ECRC62 0.36 BNILDI_00290 dinB DNA polymerase IV 0.67 BNILDI_13750 napA nitrate reductase catalytic subunit NapA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03407 DNA polymerase IV 0.67 OHPLBJKB_01505 Periplasmic nitrate reductase low > 73
Escherichia coli Nissle 1917 0.36 ECOLIN_RS01780 DNA polymerase IV 0.67 ECOLIN_RS12885 periplasmic nitrate reductase subunit alpha low > 52
Escherichia coli BL21 0.36 ECD_00226 DNA polymerase IV 0.67 ECD_02133 nitrate reductase, periplasmic, large subunit low > 60
Escherichia coli ECOR27 0.36 NOLOHH_02095 dinB DNA polymerase IV 0.67 NOLOHH_14830 napA nitrate reductase catalytic subunit NapA low > 57
Escherichia fergusonii Becca 0.36 EFB2_03787 DNA polymerase IV 0.67 EFB2_01650 Periplasmic nitrate reductase low > 86
Shewanella loihica PV-4 0.36 Shew_2871 DNA polymerase IV (RefSeq) 0.73 Shew_1770 nitrate reductase (RefSeq) low > 60
Escherichia coli BW25113 0.36 b0231 dinB DNA polymerase IV (NCBI) 0.67 b2206 napA nitrate reductase, periplasmic, large subunit (NCBI) low > 76
Escherichia coli ECOR38 0.36 HEPCGN_07825 dinB DNA polymerase IV 0.67 HEPCGN_22520 napA nitrate reductase catalytic subunit NapA low > 85
Serratia liquefaciens MT49 0.36 IAI46_04405 DNA polymerase IV 0.68 IAI46_18660 nitrate reductase catalytic subunit NapA low > 86
Shewanella sp. ANA-3 0.36 Shewana3_0949 DNA polymerase IV (RefSeq) 0.74 Shewana3_1900 nitrate reductase catalytic subunit (RefSeq) low > 73
Escherichia coli ECRC101 0.36 OKFHMN_09730 dinB DNA polymerase IV 0.67 OKFHMN_23255 napA nitrate reductase catalytic subunit NapA — —
Escherichia coli ECRC99 0.36 KEDOAH_18425 dinB DNA polymerase IV 0.67 KEDOAH_04930 napA nitrate reductase catalytic subunit NapA — —
Escherichia coli ECRC102 0.36 NIAGMN_07590 dinB DNA polymerase IV 0.67 NIAGMN_21020 napA nitrate reductase catalytic subunit NapA — —
Escherichia coli ECRC98 0.36 JDDGAC_13355 dinB DNA polymerase IV 0.67 JDDGAC_27215 napA nitrate reductase catalytic subunit NapA — —
Escherichia coli ECRC101 0.36 MCAODC_00250 dinB DNA polymerase IV 0.67 MCAODC_14305 napA nitrate reductase catalytic subunit NapA — —
Pseudomonas stutzeri RCH2 0.35 Psest_1304 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.70 Psest_3041 periplasmic nitrate reductase, large subunit low > 67
Shewanella oneidensis MR-1 0.35 SO1114 dinP DNA-damage-inducible protein P (NCBI ptt file) 0.66 SO0848 napA periplasmic nitrate reductase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_11635 DNA polymerase IV 0.68 CSW01_17580 periplasmic nitrate reductase subunit alpha low > 62
Dechlorosoma suillum PS 0.26 Dsui_2075 nucleotidyltransferase/DNA polymerase involved in DNA repair 0.66 Dsui_0508 periplasmic nitrate reductase, large subunit — —

Not shown: 58 genomes with orthologs for SMa2355 only; 5 genomes with orthologs for SMa1236 only