Conservation of cofitness between RR42_RS35220 and RR42_RS36110 in Cupriavidus basilensis FW507-4G11

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS35220 peptide ABC transporter ATP-binding protein 1.0 RR42_RS36110 membrane protein 0.41 6
Rahnella sp. WP5 0.51 EX31_RS00050 ABC transporter ATP-binding protein 0.31 EX31_RS02695 YggT family protein low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS16695 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein 0.34 BWI76_RS24105 resistance protein low > 92
Pectobacterium carotovorum WPP14 0.48 HER17_RS11005 ABC transporter ATP-binding protein 0.34 HER17_RS03800 YggT family protein low > 75
Serratia liquefaciens MT49 0.47 IAI46_14190 ABC transporter ATP-binding protein 0.32 IAI46_21420 YggT family protein low > 86
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_03126 oligopeptide transport system ATP-binding protein 0.55 H281DRAFT_04033 YggT family protein 0.29 74
Pantoea sp. MT58 0.47 IAI47_09085 ABC transporter ATP-binding protein 0.32 IAI47_03590 YggT family protein low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_02584 Oligopeptide transport ATP-binding protein OppD 0.34 MPMX20_03810 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_0871 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 0.34 EX28DRAFT_2990 Predicted integral membrane protein low > 76
Escherichia coli ECRC99 0.46 KEDOAH_25640 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 KEDOAH_08890 yggT osmotic shock tolerance protein YggT — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02437 Oligopeptide transport ATP-binding protein OppD 0.33 OHPLBJKB_00764 hypothetical protein low > 73
Escherichia coli ECOR27 0.46 NOLOHH_20405 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 NOLOHH_11120 yggT osmotic shock tolerance protein YggT low > 75
Escherichia coli ECRC102 0.46 NIAGMN_27590 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 NIAGMN_17015 yggT osmotic shock tolerance protein YggT — —
Escherichia coli ECRC98 0.46 JDDGAC_05930 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 JDDGAC_22880 yggT osmotic shock tolerance protein YggT low > 86
Escherichia coli Nissle 1917 0.46 ECOLIN_RS07525 murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 ECOLIN_RS16420 osmotic shock tolerance protein YggT — —
Escherichia coli BL21 0.46 ECD_01220 oligopeptide ABC transporter ATPase 0.33 ECD_02782 putative inner membrane protein; compensates for loss in K+ uptake — —
Escherichia coli ECOR38 0.46 HEPCGN_25110 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 HEPCGN_18555 yggT osmotic shock tolerance protein YggT low > 87
Escherichia fergusonii Becca 0.46 EFB2_02679 Oligopeptide transport ATP-binding protein OppD 0.33 EFB2_00950 hypothetical protein low > 86
Escherichia coli ECRC62 0.46 BNILDI_18550 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 BNILDI_09700 yggT osmotic shock tolerance protein YggT low > 75
Escherichia coli ECRC100 0.46 OKFHMN_28645 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 OKFHMN_19250 yggT osmotic shock tolerance protein YggT low > 80
Escherichia coli ECRC101 0.46 MCAODC_21615 oppD murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD 0.33 MCAODC_09770 yggT osmotic shock tolerance protein YggT low > 87
Escherichia coli BW25113 0.46 b1246 oppD oligopeptide transporter ATP-binding component (NCBI) 0.33 b2952 yggT predicted inner membrane protein (NCBI) low > 76
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_21860 methionine ABC transporter ATP-binding protein 0.28 AO353_08170 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_5104 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.29 Pf1N1B4_2340 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) — —
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_3425 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.25 Pf6N2E2_4599 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) low > 103
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_07715 methionine ABC transporter ATP-binding protein 0.25 AO356_13415 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.43 PS417_08075 methionine ABC transporter ATP-binding protein 0.25 PS417_26735 membrane protein — —
Shewanella loihica PV-4 0.34 Shew_2501 oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) 0.32 Shew_1135 protein of unknown function YGGT (RefSeq) — —
Alteromonas macleodii MIT1002 0.29 MIT1002_01138 putative D,D-dipeptide transport ATP-binding protein DdpD 0.31 MIT1002_03063 YGGT family protein — —

Not shown: 5 genomes with orthologs for RR42_RS35220 only; 35 genomes with orthologs for RR42_RS36110 only