Conservation of cofitness between RR42_RS11165 and RR42_RS32460 in Cupriavidus basilensis FW507-4G11

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS11165 methionine sulfoxide reductase B 1.0 RR42_RS32460 LysR family transcriptional regulator 0.30 12
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.47 H281DRAFT_06344 transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.70 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.46 ABIE53_005024 LysR family transcriptional activator of dmlA low > 113
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS09545 peptide methionine sulfoxide reductase 0.69 BPHYT_RS28830 LysR family transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS11215 methionine sulfoxide reductase B 0.52 HSERO_RS07400 LysR family transcriptional regulator low > 78
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.48 Ac3H11_3258 Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.51 GFF4979 Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme low > 90
Pseudomonas sp. RS175 0.47 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.40 PFR28_01512 HTH-type transcriptional regulator DmlR low > 88
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.43 PFLU_RS10075 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.47 PS417_08565 peptide methionine sulfoxide reductase 0.44 PS417_09420 LysR family transcriptional regulator low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3614 Protein of unknown function DUF25 0.46 Psyr_2397 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3614 Protein of unknown function DUF25 0.46 Psyr_2397 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens SBW25 0.47 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.43 PFLU_RS10075 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.41 PfGW456L13_3594 Putative transcriptional regulator LYSR-type low > 87
Enterobacter sp. TBS_079 0.45 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.35 MPMX20_03495 HTH-type transcriptional regulator DmlR low > 85
Escherichia coli ECRC102 0.45 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.46 NIAGMN_01435 dmlR DNA-binding transcriptional regulator DmlR — —
Escherichia coli ECRC99 0.45 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.46 KEDOAH_01480 dmlR DNA-binding transcriptional regulator DmlR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.46 OHPLBJKB_01934 HTH-type transcriptional regulator DmlR low > 73
Escherichia fergusonii Becca 0.45 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.38 EFB2_00751 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli BL21 0.45 ECD_01747 methionine sulfoxide reductase B 0.46 ECD_01769 transcriptional activator of dmlA — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.38 ECOLIN_RS17670 L-tartrate utilization transcriptional activator TtdR — —
Escherichia coli ECOR27 0.45 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.46 NOLOHH_17150 dmlR DNA-binding transcriptional regulator DmlR — —
Escherichia coli BW25113 0.45 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.44 b1799 yeaT putative transcriptional regulator LYSR-type (VIMSS) low > 76
Escherichia coli ECRC98 0.45 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.46 JDDGAC_01205 dmlR DNA-binding transcriptional regulator DmlR — —
Escherichia coli ECOR38 0.45 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.46 HEPCGN_05020 dmlR DNA-binding transcriptional regulator DmlR low > 87
Escherichia coli ECRC101 0.45 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.46 MCAODC_18780 dmlR DNA-binding transcriptional regulator DmlR low > 87
Escherichia coli ECRC62 0.45 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.46 BNILDI_15935 dmlR DNA-binding transcriptional regulator DmlR low > 75
Escherichia coli ECRC100 0.45 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.46 OKFHMN_26630 dmlR DNA-binding transcriptional regulator DmlR low > 80
Rahnella sp. WP5 0.45 EX31_RS06285 peptide-methionine (R)-S-oxide reductase MsrB 0.38 EX31_RS18850 LysR family transcriptional regulator low > 89
Klebsiella michiganensis M5al 0.44 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase 0.44 BWI76_RS10685 LysR family transcriptional regulator low > 92
Serratia liquefaciens MT49 0.42 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.47 IAI46_21020 LysR family transcriptional regulator low > 86

Not shown: 40 genomes with orthologs for RR42_RS11165 only; 1 genomes with orthologs for RR42_RS32460 only