Conservation of cofitness between RR42_RS20450 and RR42_RS32225 in Cupriavidus basilensis FW507-4G11

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS20450 16S rRNA methyltransferase 1.0 RR42_RS32225 NAD-dependent dehydratase 0.42 18
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS01475 16S rRNA methyltransferase 0.73 BPHYT_RS34845 NAD-dependent dehydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase 0.73 H281DRAFT_03619 dihydroflavonol-4-reductase low > 103
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.71 QEN71_RS16375 NAD-dependent epimerase/dehydratase family protein low > 153
Paraburkholderia graminis OAS925 0.52 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase 0.73 ABIE53_004637 dihydroflavonol-4-reductase low > 113
Enterobacter sp. TBS_079 0.31 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.09 MPMX20_02610 2-alkyl-3-oxoalkanoate reductase low > 85
Escherichia coli Nissle 1917 0.31 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 ECOLIN_RS17160 NAD-dependent epimerase/dehydratase family protein low > 55
Escherichia fergusonii Becca 0.31 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.12 EFB2_00831 2-alkyl-3-oxoalkanoate reductase low > 86
Escherichia coli BL21 0.31 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.13 ECD_02852 hypothetical protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.13 OHPLBJKB_00723 2-alkyl-3-oxoalkanoate reductase low > 73
Escherichia coli ECOR27 0.31 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.13 NOLOHH_10895 wcaG short-chain dehydrogenase low > 75
Escherichia coli ECRC62 0.31 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.13 BNILDI_00620 wcaG short-chain dehydrogenase low > 75
Escherichia coli ECOR38 0.31 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.13 HEPCGN_17975 wcaG short-chain dehydrogenase low > 87
Escherichia coli ECRC98 0.31 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 JDDGAC_28510 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 86
Escherichia coli ECRC102 0.31 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 NIAGMN_22345 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase — —
Escherichia coli ECRC100 0.31 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 OKFHMN_24400 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 80
Escherichia coli ECRC99 0.31 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 KEDOAH_03750 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase — —
Escherichia coli ECRC101 0.31 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 MCAODC_20540 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase low > 87
Serratia liquefaciens MT49 0.30 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.12 IAI46_16530 NAD-dependent epimerase/dehydratase family protein 0.45 39
Shewanella amazonensis SB2B 0.29 Sama_0041 sun protein (RefSeq) 0.17 Sama_1185 steroid dehydrogenase (RefSeq) low > 62
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.20 PFLU_RS16040 NAD-dependent epimerase/dehydratase family protein low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.20 PFLU_RS16040 NAD-dependent epimerase/dehydratase family protein low > 109
Rahnella sp. WP5 0.28 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.09 EX31_RS18615 NAD(P)-dependent oxidoreductase low > 89
Pectobacterium carotovorum WPP14 0.28 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.11 HER17_RS21015 NAD(P)-dependent oxidoreductase low > 75
Shewanella loihica PV-4 0.27 Shew_3738 sun protein (RefSeq) 0.14 Shew_1716 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_0033 sun protein (RefSeq) 0.15 Shewana3_2712 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.26 SO0030 sun sun protein (NCBI ptt file) 0.15 SO1745 3-beta hydroxysteroid dehydrogenase/isomerase family protein (NCBI ptt file) low > 76

Not shown: 43 genomes with orthologs for RR42_RS20450 only; 20 genomes with orthologs for RR42_RS32225 only