Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS05760 | | 3-hydroxyacyl-CoA dehydrogenase | 1.0 | RR42_RS23735 | | phenylacetyl-CoA 1,2-epoxidase, structural subunit (EC 1.14.13.149) (from data) | 0.60 | 5 |
Ralstonia sp. UNC404CL21Col | 0.73 | ABZR87_RS14655 | | 3-hydroxyacyl-CoA dehydrogenase | 0.66 | ABZR87_RS21250 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | low | > 80 |
Ralstonia solanacearum PSI07 | 0.68 | RPSI07_RS14575 | | 3-hydroxyacyl-CoA dehydrogenase | 0.62 | RPSI07_RS02140 | | phenylacetate-CoA oxygenase subunit PaaI | low | > 81 |
Ralstonia solanacearum IBSBF1503 | 0.65 | RALBFv3_RS02740 | | 3-hydroxyacyl-CoA dehydrogenase | 0.66 | RALBFv3_RS20650 | | phenylacetate-CoA oxygenase subunit PaaI | low | > 76 |
Ralstonia solanacearum UW163 | 0.65 | UW163_RS10985 | | 3-hydroxyacyl-CoA dehydrogenase | 0.66 | UW163_RS18525 | | phenylacetate-CoA oxygenase subunit PaaI | — | — |
Paraburkholderia graminis OAS925 | 0.65 | ABIE53_001618 | | 3-hydroxybutyryl-CoA dehydrogenase | 0.80 | ABIE53_000005 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC | 0.24 | 14 |
Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS24020 | | 3-hydroxyacyl-CoA dehydrogenase | 0.78 | QEN71_RS28405 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_04595 | | 3-hydroxyacyl-CoA dehydrogenase | 0.77 | H281DRAFT_05856 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC | 0.47 | 12 |
Ralstonia solanacearum GMI1000 | 0.65 | RS_RS10115 | | 3-hydroxyacyl-CoA dehydrogenase | 0.59 | RS_RS20015 | | phenylacetate-CoA oxygenase subunit PaaI | low | > 80 |
Burkholderia phytofirmans PsJN | 0.65 | BPHYT_RS06760 | | 3-hydroxyacyl-CoA dehydrogenase | 0.80 | BPHYT_RS18260 | | phenylacetic acid degradation protein | 0.45 | 7 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.53 | GFF4497 | | 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) | 0.60 | GFF1687 | | Phenylacetate-CoA oxygenase, PaaI subunit | low | > 90 |
Variovorax sp. SCN45 | 0.52 | GFF361 | | 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) | 0.46 | GFF6095 | | 1,2-phenylacetyl-CoA epoxidase, subunit C (EC 1.14.13.149) | low | > 127 |
Variovorax sp. OAS795 | 0.51 | ABID97_RS17005 | | 3-hydroxyacyl-CoA dehydrogenase | 0.45 | ABID97_RS22795 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | — | — |
Acinetobacter baumannii LAC-4 | 0.46 | RR41_RS11040 | | 3-hydroxyacyl-CoA dehydrogenase | 0.35 | RR41_RS10860 | | phenylacetate-CoA oxygenase subunit PaaC | low | > 55 |
Acinetobacter radioresistens SK82 | 0.45 | MPMX26_03059 | | 3-hydroxyadipyl-CoA dehydrogenase | 0.34 | MPMX26_01558 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | — | — |
Azospirillum sp. SherDot2 | 0.33 | MPMX19_05777 | | 3-hydroxyadipyl-CoA dehydrogenase | 0.42 | MPMX19_05772 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | low | > 112 |
Pseudomonas sp. BP01 | 0.31 | JOY50_RS11945 | paaH | 3-hydroxyacyl-CoA dehydrogenase PaaH | 0.34 | JOY50_RS11915 | paaC | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | — | — |
Marinobacter adhaerens HP15 | 0.30 | HP15_2693 | | 3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-) (from data) | 0.38 | HP15_2699 | | phenylacetate-CoA oxygenase, PaaI subunit | 0.53 | 9 |
Pseudomonas putida KT2440 | 0.30 | PP_3282 | | 3-hydroxyadipyl-CoA dehydrogenase | 0.34 | PP_3276 | | ring 1,2-phenylacetyl-CoA epoxidase beta subunit | 0.64 | 7 |
Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_2432 | | 3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-) | 0.37 | PfGW456L13_2425 | | Phenylacetate-CoA oxygenase, PaaI subunit | low | > 87 |
Serratia liquefaciens MT49 | 0.29 | IAI46_16385 | | 3-hydroxyacyl-CoA dehydrogenase | 0.38 | IAI46_16360 | | phenylacetate-CoA oxygenase subunit PaaC | low | > 86 |
Enterobacter sp. TBS_079 | 0.28 | MPMX20_02149 | | 3-hydroxyadipyl-CoA dehydrogenase | 0.36 | MPMX20_02144 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | 0.38 | 33 |
Enterobacter asburiae PDN3 | 0.28 | EX28DRAFT_1413 | | 3-hydroxyacyl-CoA dehydrogenase PaaC | 0.34 | EX28DRAFT_1418 | | phenylacetate-CoA oxygenase, PaaI subunit | low | > 76 |
Pseudomonas sp. SVBP6 | 0.28 | COO64_RS25525 | paaH | 3-hydroxyacyl-CoA dehydrogenase PaaH | 0.36 | COO64_RS25495 | paaC | 1,2-phenylacetyl-CoA epoxidase subunit PaaC | low | > 93 |
Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS20645 | | 3-hydroxyacyl-CoA dehydrogenase | 0.41 | HSERO_RS20620 | | phenylacetic acid degradation protein | — | — |
Klebsiella michiganensis M5al | 0.27 | BWI76_RS13125 | | 3-hydroxyacyl-CoA dehydrogenase | 0.35 | BWI76_RS13100 | | phenylacetate-CoA oxygenase subunit PaaI | low | > 92 |
Escherichia coli BW25113 | 0.27 | b1395 | paaH | 3-hydroxybutyryl-CoA dehydrogenase (NCBI) | 0.38 | b1390 | paaC | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | low | > 76 |
Escherichia coli ECOR27 | 0.26 | NOLOHH_19455 | paaC | 3-hydroxyacyl-CoA dehydrogenase PaaC | 0.38 | NOLOHH_19480 | paaC | phenylacetate-CoA oxygenase subunit PaaC | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.26 | OHPLBJKB_02316 | | 3-hydroxyadipyl-CoA dehydrogenase | 0.37 | OHPLBJKB_02321 | | 1,2-phenylacetyl-CoA epoxidase, subunit C | low | > 74 |
Escherichia coli ECRC62 | 0.26 | BNILDI_17910 | paaC | 3-hydroxyacyl-CoA dehydrogenase PaaC | 0.38 | BNILDI_17935 | paaC | phenylacetate-CoA oxygenase subunit PaaC | low | > 75 |
Klebsiella pneumoniae MKP103 | 0.25 | KDGMDA_20735 | | 3-hydroxyacyl-CoA dehydrogenase PaaC | 0.38 | KDGMDA_20710 | | phenylacetate-CoA oxygenase subunit PaaC | low | > 95 |
Not shown: 5 genomes with orthologs for RR42_RS05760 only; 6 genomes with orthologs for RR42_RS23735 only