Conservation of cofitness between RR42_RS00905 and RR42_RS21680 in Cupriavidus basilensis FW507-4G11

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS00905 haloacid dehalogenase 1.0 RR42_RS21680 hypothetical protein 0.39 2
Paraburkholderia graminis OAS925 0.41 ABIE53_006171 HAD superfamily hydrolase (TIGR01509 family) 0.26 ABIE53_002226 AcrR family transcriptional regulator low > 113
Variovorax sp. OAS795 0.41 ABID97_RS25155 HAD family phosphatase 0.30 ABID97_RS26150 TetR/AcrR family transcriptional regulator low > 91
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02444 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 0.28 H281DRAFT_01426 transcriptional regulator, TetR family low > 103
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS37130 HAD family phosphatase 0.28 QEN71_RS09555 TetR/AcrR family transcriptional regulator low > 153
Rhodopseudomonas palustris CGA009 0.27 TX73_002330 HAD family hydrolase 0.33 TX73_015645 TetR/AcrR family transcriptional regulator low > 86
Rahnella sp. WP5 0.26 EX31_RS06035 6-phosphogluconate phosphatase 0.30 EX31_RS23895 TetR/AcrR family transcriptional regulator low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF1739 Putative phosphatase YieH 0.31 GFF3394 putative transcriptional repressor low > 78
Klebsiella michiganensis M5al 0.25 BWI76_RS00115 6-phosphogluconate phosphatase 0.32 BWI76_RS11190 putative TetR/AcrR family transcriptional regulatory protein low > 92
Dickeya dianthicola 67-19 0.25 HGI48_RS21600 6-phosphogluconate phosphatase 0.30 HGI48_RS05310 TetR/AcrR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.25 DZA65_RS22585 6-phosphogluconate phosphatase 0.21 DZA65_RS08485 TetR/AcrR family transcriptional regulator low > 75
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3999 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 0.33 EX28DRAFT_1819 transcriptional regulator, TetR family low > 76
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_2217 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 0.30 Ga0059261_3383 transcriptional regulator, TetR family
Escherichia coli ECOR38 0.24 HEPCGN_13635 yieH 6-phosphogluconate phosphatase 0.34 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR low > 87
Escherichia coli BW25113 0.24 b3715 yieH predicted hydrolase (NCBI) 0.34 b1111 ycfQ orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC98 0.24 JDDGAC_18550 yieH 6-phosphogluconate phosphatase 0.34 JDDGAC_07145 comR TetR family copper-responsive transcriptional repressor ComR low > 86
Escherichia coli ECRC101 0.24 MCAODC_05440 yieH 6-phosphogluconate phosphatase 0.34 MCAODC_22845 comR TetR family copper-responsive transcriptional repressor ComR low > 87
Escherichia coli Nissle 1917 0.24 ECOLIN_RS21390 6-phosphogluconate phosphatase 0.34 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR
Escherichia coli ECRC99 0.24 KEDOAH_13220 yieH 6-phosphogluconate phosphatase 0.34 KEDOAH_24270 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia coli ECRC102 0.24 NIAGMN_12685 yieH 6-phosphogluconate phosphatase 0.34 NIAGMN_24345 comR TetR family copper-responsive transcriptional repressor ComR
Escherichia coli ECRC100 0.24 OKFHMN_14930 yieH 6-phosphogluconate phosphatase 0.34 OKFHMN_03485 comR TetR family copper-responsive transcriptional repressor ComR low > 80
Escherichia fergusonii Becca 0.24 EFB2_04917 6-phosphogluconate phosphatase 0.34 EFB2_02864 HTH-type transcriptional repressor ComR low > 86
Enterobacter sp. TBS_079 0.24 MPMX20_04644 6-phosphogluconate phosphatase 0.34 MPMX20_01792 HTH-type transcriptional repressor ComR low > 85
Escherichia coli ECRC62 0.23 BNILDI_04450 yieH 6-phosphogluconate phosphatase 0.34 BNILDI_19175 comR TetR family copper-responsive transcriptional repressor ComR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_04338 6-phosphogluconate phosphatase 0.34 OHPLBJKB_02555 HTH-type transcriptional repressor ComR low > 73
Escherichia coli ECOR27 0.23 NOLOHH_07080 yieH 6-phosphogluconate phosphatase 0.34 NOLOHH_21010 comR TetR family copper-responsive transcriptional repressor ComR low > 75
Escherichia coli BL21 0.23 ECD_03599 phosphoenolpyruvate and 6-phosphogluconate phosphatase 0.34 ECD_01107 repressor for bhsA(ycfR) low > 61
Pseudomonas simiae WCS417 0.22 PS417_09695 hydrolase 0.29 PS417_19005 TetR family transcriptional regulator
Serratia liquefaciens MT49 0.21 IAI46_25215 6-phosphogluconate phosphatase 0.33 IAI46_07070 TetR/AcrR family transcriptional regulator low > 86
Pantoea sp. MT58 0.19 IAI47_18805 6-phosphogluconate phosphatase 0.31 IAI47_19780 TetR/AcrR family transcriptional regulator low > 76
Shewanella sp. ANA-3 0.17 Shewana3_0432 2-deoxyglucose-6-phosphatase (RefSeq) 0.33 Shewana3_1076 TetR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.16 SO0431 HAD-superfamily hydrolase, subfamily IA, variant 3 protein family (NCBI ptt file) 0.33 SO3494 transcriptional regulator, TetR family (NCBI ptt file)

Not shown: 32 genomes with orthologs for RR42_RS00905 only; 4 genomes with orthologs for RR42_RS21680 only