Conservation of cofitness between RR42_RS11930 and RR42_RS17055 in Cupriavidus basilensis FW507-4G11

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS11930 succinyldiaminopimelate aminotransferase 1.0 RR42_RS17055 LuxR family transcriptional regulator 0.38 17
Ralstonia solanacearum GMI1000 0.77 RS_RS06990 succinyldiaminopimelate transaminase 0.68 RS_RS12325 DNA-binding response regulator — —
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS11770 succinyldiaminopimelate transaminase 0.69 ABZR87_RS00385 response regulator transcription factor low > 80
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS00320 succinyldiaminopimelate transaminase 0.68 RALBFv3_RS04765 DNA-binding response regulator — —
Ralstonia solanacearum UW163 0.76 UW163_RS13650 succinyldiaminopimelate transaminase 0.68 UW163_RS08905 DNA-binding response regulator — —
Ralstonia solanacearum PSI07 0.76 RPSI07_RS17155 succinyldiaminopimelate transaminase 0.68 RPSI07_RS12620 DNA-binding response regulator low > 81
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS12185 succinyldiaminopimelate aminotransferase 0.25 BPHYT_RS10560 hypothetical protein low > 109
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2295 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) 0.34 Ac3H11_3000 two component transcriptional regulator, LuxR family low > 79
Variovorax sp. OAS795 0.59 ABID97_RS16630 succinyldiaminopimelate transaminase 0.20 ABID97_RS29195 response regulator transcription factor low > 91
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_1340 Aminotransferase, class I and II 0.23 Psyr_1384 regulatory protein, LuxR:Response regulator receiver — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_1340 Aminotransferase, class I and II 0.23 Psyr_1384 regulatory protein, LuxR:Response regulator receiver — —
Pseudomonas putida KT2440 0.53 PP_1588 N-succinyl-L,L-diaminopimelate aminotransferase alternative 0.23 PP_1635 DNA-binding response regulator low > 96
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3080 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) 0.24 Pf1N1B4_3150 Transcriptional regulator, LuxR family — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_06055 succinyldiaminopimelate transaminase 0.23 AO356_05640 LuxR family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.53 PFR28_00393 LL-diaminopimelate aminotransferase 0.23 PFR28_00478 Transcriptional regulatory protein DegU low > 88
Pseudomonas sp. S08-1 0.52 OH686_06500 succinyldiaminopimelate transaminase 0.25 OH686_18240 Two-component transcriptional response regulator, LuxR family low > 80
Pseudomonas stutzeri RCH2 0.52 Psest_1470 succinyldiaminopimelate transaminase 0.24 Psest_2864 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain low > 67
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS06260 succinyldiaminopimelate transaminase 0.24 PFLU_RS05910 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS06260 succinyldiaminopimelate transaminase 0.24 PFLU_RS05910 response regulator transcription factor — —
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4713 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) 0.23 PfGW456L13_4662 Transcriptional regulator, LuxR family low > 87
Pseudomonas simiae WCS417 0.52 PS417_06195 succinyldiaminopimelate aminotransferase 0.23 PS417_05840 LuxR family transcriptional regulator low > 88
Acinetobacter radioresistens SK82 0.48 MPMX26_01868 LL-diaminopimelate aminotransferase 0.25 MPMX26_02902 Transcriptional activator protein ExaE low > 36
Dinoroseobacter shibae DFL-12 0.32 Dshi_0060 aminotransferase class I and II (RefSeq) 0.26 Dshi_0465 two component transcriptional regulator, LuxR family (RefSeq) — —

Not shown: 18 genomes with orthologs for RR42_RS11930 only; 7 genomes with orthologs for RR42_RS17055 only