Conservation of cofitness between RR42_RS11755 and RR42_RS07655 in Cupriavidus basilensis FW507-4G11

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS11755 multidrug DMT transporter permease 1.0 RR42_RS07655 cystathionine beta-lyase 0.31 5
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS11960 DMT family transporter 0.75 ABZR87_RS13260 cystathionine beta-lyase low > 80
Ralstonia solanacearum PSI07 0.71 RPSI07_RS16980 EamA/RhaT family transporter 0.73 RPSI07_RS16025 cystathionine beta-lyase low > 81
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS00510 EamA/RhaT family transporter 0.73 RALBFv3_RS01465 cystathionine beta-lyase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS13840 EamA/RhaT family transporter 0.73 UW163_RS14775 cystathionine beta-lyase — —
Ralstonia solanacearum GMI1000 0.66 RS_RS07165 EamA/RhaT family transporter 0.74 RS_RS08260 cystathionine beta-lyase low > 80
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS06535 DMT family transporter 0.63 QEN71_RS22165 cystathionine beta-lyase low > 153
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS12025 multidrug DMT transporter permease 0.64 BPHYT_RS09190 cystathionine beta-lyase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_00633 Permease of the drug/metabolite transporter (DMT) superfamily 0.65 H281DRAFT_00859 cystathionine beta-lyase 0.36 77
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS06235 multidrug DMT transporter permease 0.55 HSERO_RS14995 cystathionine beta-lyase low > 78
Azospirillum brasilense Sp245 0.36 AZOBR_RS03410 multidrug DMT transporter permease 0.36 AZOBR_RS08650 cystathionine beta-lyase low > 97
Dickeya dadantii 3937 0.34 DDA3937_RS08695 DMT family transporter 0.34 DDA3937_RS01815 cystathionine beta-lyase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2932 putative membrane protein 0.41 GFF4850 Cystathionine beta-lyase (EC 4.4.1.8) low > 90
Pectobacterium carotovorum WPP14 0.27 HER17_RS14160 DMT family transporter 0.34 HER17_RS19690 cystathionine beta-lyase low > 75
Klebsiella michiganensis M5al 0.24 BWI76_RS02710 EamA family transporter 0.34 BWI76_RS24285 cystathionine beta-lyase low > 92
Escherichia coli ECOR38 0.23 HEPCGN_10255 ytfF Inner membrane protein YtfF 0.35 HEPCGN_17825 metC cystathionine beta-lyase low > 87
Escherichia coli BL21 0.23 ECD_04082 DMT transporter family inner membrane protein 0.35 ECD_02881 cystathionine beta-lyase, PLP-dependent low > 61
Escherichia coli ECRC101 0.23 MCAODC_02575 ytfF Inner membrane protein YtfF 0.35 MCAODC_09475 metC cystathionine beta-lyase low > 87
Escherichia coli ECRC102 0.23 NIAGMN_09910 ytfF Inner membrane protein YtfF 0.35 NIAGMN_16725 metC cystathionine beta-lyase — —
Serratia liquefaciens MT49 0.23 IAI46_13035 DMT family transporter 0.36 IAI46_21725 cystathionine beta-lyase low > 86
Escherichia coli ECRC98 0.23 JDDGAC_15700 ytfF Inner membrane protein YtfF 0.35 JDDGAC_22595 metC cystathionine beta-lyase low > 86
Escherichia coli ECRC100 0.23 OKFHMN_12060 ytfF Inner membrane protein YtfF 0.35 OKFHMN_18960 metC cystathionine beta-lyase low > 80
Escherichia fergusonii Becca 0.23 EFB2_04318 Inner membrane protein YtfF 0.34 EFB2_00802 Cystathionine beta-lyase MetC low > 86
Escherichia coli Nissle 1917 0.23 ECOLIN_RS24460 DMT family transporter 0.34 ECOLIN_RS17315 cystathionine beta-lyase low > 55
Escherichia coli ECRC99 0.23 KEDOAH_16095 ytfF Inner membrane protein YtfF 0.35 KEDOAH_09185 metC cystathionine beta-lyase — —
Pantoea sp. MT58 0.23 IAI47_17795 DMT family transporter 0.32 IAI47_03215 cystathionine beta-lyase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03823 Inner membrane protein YtfF 0.35 OHPLBJKB_00693 Cystathionine beta-lyase MetC low > 73
Escherichia coli ECRC62 0.23 BNILDI_07200 ytfF Inner membrane protein YtfF 0.35 BNILDI_00780 metC cystathionine beta-lyase low > 75
Escherichia coli BW25113 0.23 b4210 ytfF predicted inner membrane protein (RefSeq) 0.34 b3008 metC cystathionine beta-lyase (NCBI) low > 76
Escherichia coli ECOR27 0.23 NOLOHH_04320 ytfF Inner membrane protein YtfF 0.35 NOLOHH_10735 metC cystathionine beta-lyase low > 75
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3394 Permeases of the drug/metabolite transporter (DMT) superfamily 0.34 EX28DRAFT_3046 cystathionine beta-lyase, bacterial low > 76
Enterobacter sp. TBS_079 0.23 MPMX20_00487 Inner membrane protein YtfF 0.34 MPMX20_03852 Cystathionine beta-lyase MetC low > 85
Variovorax sp. SCN45 0.22 GFF6462 Integral membrane protein 0.43 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) low > 127

Not shown: 14 genomes with orthologs for RR42_RS11755 only; 9 genomes with orthologs for RR42_RS07655 only