Conservation of cofitness between Psyr_1709 and Psyr_3336 in Pseudomonas syringae pv. syringae B728a

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1709 Major facilitator superfamily 1.0 Psyr_3336 transcriptional regulator, LacI family 0.29 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1709 Major facilitator superfamily 1.00 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_24590 MFS transporter 0.67 AO356_05065 LacI family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.92 PFR28_01580 Quinolone resistance transporter 0.67 PFR28_00593 HTH-type transcriptional regulator GntR 0.16 64
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_3318 Nitrate/nitrite transporter 0.67 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_610 Nitrate/nitrite transporter 0.67 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_4622 Nitrate/nitrite transporter 0.68 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor 0.23 34
Pseudomonas fluorescens SBW25 0.88 PFLU_RS11630 MFS transporter 0.66 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS11630 MFS transporter 0.66 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.88 PS417_11005 L-arabinose transporter (from data) 0.67 PS417_21990 LacI family transcriptional regulator low > 88
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS33945 MFS transporter 0.28 RR42_RS03860 transcriptional regulator low > 128
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS01525 MFS transporter 0.28 ABZR87_RS18255 LacI family DNA-binding transcriptional regulator low > 80
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS31040 MFS transporter 0.31 QEN71_RS10090 LacI family DNA-binding transcriptional regulator low > 153
Variovorax sp. SCN45 0.42 GFF1379 Uncharacterized MFS-type transporter 0.29 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor low > 127
Agrobacterium fabrum C58 0.42 Atu2708 MFS permease 0.24 Atu4685 LacI family transcriptional regulator low > 89
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00981 D-galactonate transporter 0.30 H281DRAFT_03425 transcriptional regulator, LacI family — —
Rhizobium sp. OAE497 0.41 ABIE40_RS20120 MFS transporter 0.30 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS09995 membrane protein 0.43 BPHYT_RS00410 LacI family transcription regulator low > 109
Paraburkholderia graminis OAS925 0.39 ABIE53_002220 ACS family tartrate transporter-like MFS transporter 0.31 ABIE53_005334 LacI family gluconate utilization system Gnt-I transcriptional repressor low > 113
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS22270 MFS transporter 0.39 HSERO_RS05460 LacI family transcription regulator low > 78
Pectobacterium carotovorum WPP14 0.34 HER17_RS17310 MFS transporter 0.29 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1851 L-rhamnonate transporter (predicted by genome context) 0.29 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Escherichia coli Nissle 1917 0.33 ECOLIN_RS13090 MFS transporter 0.31 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Escherichia coli ECOR38 0.33 HEPCGN_22275 MFS transporter 0.31 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC98 0.33 JDDGAC_26995 MFS transporter 0.31 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 86
Escherichia fergusonii Becca 0.33 EFB2_01610 Inner membrane transport protein RhmT 0.31 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli ECRC102 0.33 NIAGMN_20800 MFS transporter 0.31 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli BW25113 0.33 b2246 b2246 putative transport protein (VIMSS) 0.31 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76

Not shown: 3 genomes with orthologs for Psyr_1709 only; 36 genomes with orthologs for Psyr_3336 only