| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0222 | | DNA replication and repair protein RadC | 1.0 | Psyr_2676 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | 0.32 | 4 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0222 | | DNA replication and repair protein RadC | 1.00 | Psyr_2676 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal | low | > 86 |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS16995 | | hypothetical protein | 0.48 | RR42_RS11230 | | peptide ABC transporter ATP-binding protein | low | > 128 |
| Pantoea agglomerans CFBP13505 P0401 | 0.49 | PagCFBP13505_RS18725 | | JAB domain-containing protein | 0.44 | PagCFBP13505_RS02925 | | ABC transporter ATP-binding protein | low | > 74 |
| Pantoea sp. MT58 | 0.49 | IAI47_00620 | | DNA repair protein RadC | 0.44 | IAI47_09085 | | ABC transporter ATP-binding protein | low | > 76 |
| Dickeya dianthicola 67-19 | 0.48 | HGI48_RS00700 | | DNA repair protein RadC | 0.43 | HGI48_RS10395 | | ABC transporter ATP-binding protein | low | > 71 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS20515 | | DNA repair protein RadC | 0.43 | DDA3937_RS10390 | | ABC transporter ATP-binding protein | low | > 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF1170 | | DNA repair protein RadC | 0.43 | GFF182 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | low | > 90 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS03085 | | DNA repair protein RadC | 0.59 | QEN71_RS31475 | | ABC transporter ATP-binding protein | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_04066 | | DNA replication and repair protein RadC | 0.60 | H281DRAFT_01032 | | peptide/nickel transport system ATP-binding protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_003289 | | DNA repair protein RadC | 0.59 | ABIE53_006350 | | peptide/nickel transport system ATP-binding protein | low | > 113 |
| Rahnella sp. WP5 | 0.44 | EX31_RS14470 | | JAB domain-containing protein | 0.63 | EX31_RS09170 | | ABC transporter ATP-binding protein | low | > 89 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS07700 | | DNA repair protein RadC | 0.48 | ABID97_RS22875 | | ABC transporter ATP-binding protein | low | > 91 |
| Erwinia tracheiphila HP pepo 2.2 | 0.43 | IJEDHG_07780 | radC | DNA repair protein RadC | 0.44 | IJEDHG_22750 | oppD | ABC transporter ATP-binding protein | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS21995 | radC | DNA repair protein RadC | 0.43 | LU632_RS12865 | | ABC transporter ATP-binding protein | low | > 73 |
| Variovorax sp. SCN45 | 0.42 | GFF5700 | | UPF0758 family protein | 0.48 | GFF2342 | | ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) | low | > 127 |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_3888 | | DNA repair protein radc | 0.61 | EX28DRAFT_2675 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_1774 | | DNA repair protein RadC | 0.45 | Ac3H11_4825 | | Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) | low | > 79 |
| Enterobacter sp. TBS_079 | 0.41 | MPMX20_00097 | | hypothetical protein | 0.60 | MPMX20_00903 | | Oligopeptide transport ATP-binding protein OppD | 0.16 | 53 |
| Klebsiella pneumoniae MKP103 | 0.40 | KDGMDA_08030 | | DNA repair protein RadC | 0.45 | KDGMDA_23610 | | dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein | low | > 95 |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS27365 | | hypothetical protein | 0.44 | BWI76_RS16695 | | dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein | low | > 92 |
| Xanthobacter sp. DMC5 | 0.28 | GFF65 | | hypothetical protein | 0.45 | GFF800 | | Oligopeptide transport ATP-binding protein OppD | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.27 | DVU1193 | radC | DNA repair protein RadC (TIGR) | 0.43 | DVU2576 | | oligopeptide ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.27 | DvMF_3086 | | DNA repair protein RadC (RefSeq) | 0.45 | DvMF_1020 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | low | > 51 |
| Fusobacterium nucleatum SB010 | 0.25 | HUW76_05635 | | DNA repair protein RadC | 0.45 | HUW76_03530 | | ABC transporter ATP-binding protein | low | > 35 |
| Bosea sp. OAE506 | 0.25 | ABIE41_RS13815 | | DNA repair protein RadC | 0.45 | ABIE41_RS16380 | | ABC transporter ATP-binding protein | low | > 77 |
Not shown: 84 genomes with orthologs for Psyr_0222 only; 4 genomes with orthologs for Psyr_2676 only