Conservation of cofitness between Psyr_0222 and Psyr_2676 in Pseudomonas syringae pv. syringae B728a

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0222 DNA replication and repair protein RadC 1.0 Psyr_2676 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.32 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0222 DNA replication and repair protein RadC 1.00 Psyr_2676 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal low > 86
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS16995 hypothetical protein 0.48 RR42_RS11230 peptide ABC transporter ATP-binding protein low > 128
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS18725 JAB domain-containing protein 0.44 PagCFBP13505_RS02925 ABC transporter ATP-binding protein low > 74
Pantoea sp. MT58 0.49 IAI47_00620 DNA repair protein RadC 0.44 IAI47_09085 ABC transporter ATP-binding protein low > 76
Dickeya dianthicola 67-19 0.48 HGI48_RS00700 DNA repair protein RadC 0.43 HGI48_RS10395 ABC transporter ATP-binding protein low > 71
Dickeya dadantii 3937 0.47 DDA3937_RS20515 DNA repair protein RadC 0.43 DDA3937_RS10390 ABC transporter ATP-binding protein low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF1170 DNA repair protein RadC 0.43 GFF182 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 90
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS03085 DNA repair protein RadC 0.59 QEN71_RS31475 ABC transporter ATP-binding protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04066 DNA replication and repair protein RadC 0.60 H281DRAFT_01032 peptide/nickel transport system ATP-binding protein low > 103
Paraburkholderia graminis OAS925 0.45 ABIE53_003289 DNA repair protein RadC 0.59 ABIE53_006350 peptide/nickel transport system ATP-binding protein low > 113
Rahnella sp. WP5 0.44 EX31_RS14470 JAB domain-containing protein 0.63 EX31_RS09170 ABC transporter ATP-binding protein low > 89
Variovorax sp. OAS795 0.43 ABID97_RS07700 DNA repair protein RadC 0.48 ABID97_RS22875 ABC transporter ATP-binding protein low > 91
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_07780 radC DNA repair protein RadC 0.44 IJEDHG_22750 oppD ABC transporter ATP-binding protein low > 61
Erwinia tracheiphila SCR3 0.43 LU632_RS21995 radC DNA repair protein RadC 0.43 LU632_RS12865 ABC transporter ATP-binding protein low > 73
Variovorax sp. SCN45 0.42 GFF5700 UPF0758 family protein 0.48 GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) low > 127
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3888 DNA repair protein radc 0.61 EX28DRAFT_2675 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain low > 76
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1774 DNA repair protein RadC 0.45 Ac3H11_4825 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) low > 79
Enterobacter sp. TBS_079 0.41 MPMX20_00097 hypothetical protein 0.60 MPMX20_00903 Oligopeptide transport ATP-binding protein OppD 0.16 53
Klebsiella pneumoniae MKP103 0.40 KDGMDA_08030 DNA repair protein RadC 0.45 KDGMDA_23610 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein low > 95
Klebsiella michiganensis M5al 0.40 BWI76_RS27365 hypothetical protein 0.44 BWI76_RS16695 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein low > 92
Xanthobacter sp. DMC5 0.28 GFF65 hypothetical protein 0.45 GFF800 Oligopeptide transport ATP-binding protein OppD
Desulfovibrio vulgaris Hildenborough JW710 0.27 DVU1193 radC DNA repair protein RadC (TIGR) 0.43 DVU2576 oligopeptide ABC transporter, ATP-binding protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_3086 DNA repair protein RadC (RefSeq) 0.45 DvMF_1020 oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) low > 51
Fusobacterium nucleatum SB010 0.25 HUW76_05635 DNA repair protein RadC 0.45 HUW76_03530 ABC transporter ATP-binding protein low > 35
Bosea sp. OAE506 0.25 ABIE41_RS13815 DNA repair protein RadC 0.45 ABIE41_RS16380 ABC transporter ATP-binding protein low > 77

Not shown: 84 genomes with orthologs for Psyr_0222 only; 4 genomes with orthologs for Psyr_2676 only