Conservation of cofitness between Psyr_3165 and Psyr_2256 in Pseudomonas syringae pv. syringae B728a

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3165 transcriptional regulator, LysR family 1.0 Psyr_2256 ABC transporter 0.36 12
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3165 transcriptional regulator, LysR family 1.00 Psyr_2256 ABC transporter low > 86
Pseudomonas fluorescens SBW25 0.76 PFLU_RS07335 LysR family transcriptional regulator 0.78 PFLU_RS08785 phosphonate C-P lyase system protein PhnL low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS07335 LysR family transcriptional regulator 0.78 PFLU_RS08785 phosphonate C-P lyase system protein PhnL low > 109
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS27430 LysR family transcriptional regulator 0.49 BPHYT_RS29485 phosphonate ABC transporter ATP-binding protein low > 109
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS11315 LysR family transcriptional regulator 0.51 QEN71_RS14225 phosphonate C-P lyase system protein PhnL low > 153
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4371 LysR family transcriptional regulator YbhD 0.47 Ac3H11_4547 Phosphonates transport ATP-binding protein PhnL low > 79
Pantoea sp. MT58 0.55 IAI47_10140 LysR family transcriptional regulator 0.59 IAI47_07780 phosphonate C-P lyase system protein PhnL low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0581 Transcriptional regulator 0.58 EX28DRAFT_4209 phosphonate C-P lyase system protein PhnL 0.57 62
Enterobacter sp. TBS_079 0.54 MPMX20_02971 HTH-type transcriptional regulator CynR 0.57 MPMX20_00316 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL low > 85
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS28580 LysR family transcriptional regulator 0.54 RR42_RS28110 phosphonate ABC transporter ATPase low > 128
Agrobacterium fabrum C58 0.45 Atu4264 LysR family transcriptional regulator 0.56 Atu0176 ABC transporter, nucleotide binding/ATPase protein (phosphonate) low > 89
Dickeya dadantii 3937 0.44 DDA3937_RS07805 LysR family transcriptional regulator 0.56 DDA3937_RS07625 phosphonate C-P lyase system protein PhnL low > 74
Escherichia coli ECOR27 0.41 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 NOLOHH_04935 phnL phosphonate C-P lyase system protein PhnL low > 75
Escherichia coli ECRC99 0.41 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 KEDOAH_15490 phnL phosphonate C-P lyase system protein PhnL — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS04090 LysR family transcriptional regulator 0.58 ECOLIN_RS23720 phosphonate C-P lyase system protein PhnL — —
Escherichia coli ECRC62 0.41 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 BNILDI_06560 phnL phosphonate C-P lyase system protein PhnL low > 75
Escherichia coli ECRC102 0.41 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 NIAGMN_10520 phnL phosphonate C-P lyase system protein PhnL — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.57 OHPLBJKB_03948 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL low > 73
Escherichia coli ECRC101 0.41 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 MCAODC_03185 phnL phosphonate C-P lyase system protein PhnL low > 87
Escherichia fergusonii Becca 0.41 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.58 EFB2_04486 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL low > 86
Escherichia coli ECOR38 0.41 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 HEPCGN_11305 phnL phosphonate C-P lyase system protein PhnL low > 87
Escherichia coli ECRC98 0.41 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 JDDGAC_16310 phnL phosphonate C-P lyase system protein PhnL low > 86
Escherichia coli ECRC100 0.41 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.57 OKFHMN_12675 phnL phosphonate C-P lyase system protein PhnL low > 80
Escherichia coli BW25113 0.41 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.57 b4096 phnL carbon-phosphorus lyase complex subunit (NCBI) low > 76
Klebsiella michiganensis M5al 0.40 BWI76_RS04365 LysR family transcriptional regulator 0.58 BWI76_RS02200 phosphonate C-P lyase system protein PhnL low > 92
Bosea sp. OAE506 0.32 ABIE41_RS16550 LysR family transcriptional regulator 0.62 ABIE41_RS07665 phosphonate C-P lyase system protein PhnL low > 77
Variovorax sp. SCN45 0.31 GFF2416 Transcriptional regulator YbhD, LysR family 0.47 GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) low > 127
Rahnella sp. WP5 0.30 EX31_RS20145 LysR family transcriptional regulator 0.58 EX31_RS08435 phosphonate C-P lyase system protein PhnL low > 89
Sinorhizobium meliloti 1021 0.28 SM_b20123 transcriptional regulator 0.53 SM_b20764 phosphonate uptake ABC transporter ATP-binding protein — —
Serratia liquefaciens MT49 0.28 IAI46_18415 LysR family transcriptional regulator 0.60 IAI46_02080 phosphonate C-P lyase system protein PhnL low > 86
Dickeya dianthicola 67-19 0.25 HGI48_RS00115 LysR family transcriptional regulator 0.55 HGI48_RS07475 phosphonate C-P lyase system protein PhnL — —
Escherichia coli BL21 0.24 ECD_02308 transcriptional regulator of yefH 0.57 ECD_03968 ribophosphonate triphosphate synthase subunit; putative ABC transporter-related ATPase low > 61
Phaeobacter inhibens DSM 17395 0.18 PGA1_262p01470 transcriptional regulator, LysR family 0.54 PGA1_c04290 phosphonates transport ATP-binding protein PhnL low > 62

Not shown: 22 genomes with orthologs for Psyr_3165 only; 5 genomes with orthologs for Psyr_2256 only