| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4775 | | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region | 1.0 | Psyr_2180 | | transcriptional regulator, LysR family | 0.25 | 8 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4775 | | Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region | 1.00 | Psyr_2180 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_07675 | | ferredoxin | 0.20 | AO353_23070 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS27860 | | glycine-betaine demethylase subunit GbcB | 0.21 | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS27860 | | glycine-betaine demethylase subunit GbcB | 0.21 | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_2448 | | GbcB Glycine betaine demethylase subunit B | 0.96 | Pf1N1B4_5605 | | LysR family regulatory protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.43 | QEN71_RS08350 | | hybrid-cluster NAD(P)-dependent oxidoreductase | 0.28 | QEN71_RS39320 | | LysR substrate-binding domain-containing protein | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS17500 | | hybrid-cluster NAD(P)-dependent oxidoreductase | 0.17 | RS_RS21630 | | LysR family transcriptional regulator | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_02476 | | Ferredoxin-NADP reductase | 0.24 | H281DRAFT_01365 | | transcriptional regulator, LysR family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.41 | BPHYT_RS25220 | | ferredoxin oxidoreductase | 0.22 | BPHYT_RS10850 | | LysR family transcriptional regulator | low | > 109 |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_04719 | | 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component | 0.28 | MPMX19_06975 | | HTH-type transcriptional regulator HdfR | low | > 112 |
| Rahnella sp. WP5 | 0.22 | EX31_RS18595 | | NADH oxidoreductase | 0.21 | EX31_RS15525 | | nitrogen assimilation transcriptional regulator | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.19 | RR42_RS31980 | | 3-ketosteroid-9-alpha-hydroxylase | 0.21 | RR42_RS27215 | | LysR family transcriptional regulator | — | — |
| Dickeya dianthicola ME23 | 0.19 | DZA65_RS09860 | | NADH oxidoreductase | 0.22 | DZA65_RS19795 | | nitrogen assimilation transcriptional regulator | low | > 75 |
| Dickeya dianthicola 67-19 | 0.19 | HGI48_RS09550 | | NADH oxidoreductase | 0.23 | HGI48_RS18660 | | nitrogen assimilation transcriptional regulator NAC | low | > 71 |
| Dickeya dadantii 3937 | 0.19 | DDA3937_RS09535 | | NADH oxidoreductase | 0.22 | DDA3937_RS08235 | | nitrogen assimilation transcriptional regulator NAC | low | > 74 |
| Pseudomonas sp. S08-1 | 0.18 | OH686_04175 | | Flavodoxin (ferredoxin-NADPH reductases) family 1 | 0.18 | OH686_06115 | | Transcriptional regulator, LysR family | low | > 80 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.17 | GFF4910 | | NADH oxidoreductase hcr (EC 1.-.-.-) | 0.18 | GFF4595 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | low | > 78 |
| Herbaspirillum seropedicae SmR1 | 0.17 | HSERO_RS20630 | | phenylacetic acid degradation protein | 0.22 | HSERO_RS11270 | | LysR family transcriptional regulator | low | > 78 |
| Ralstonia solanacearum PSI07 | 0.16 | RPSI07_RS02150 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.18 | RPSI07_RS02820 | | LysR family transcriptional regulator | low | > 81 |
| Variovorax sp. SCN45 | 0.15 | GFF7351 | | 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) | 0.24 | GFF881 | | Transcriptional regulator ligR, LysR family | low | > 127 |
| Rhodopseudomonas palustris CGA009 | 0.15 | TX73_019490 | | phenylacetate-CoA oxygenase/reductase subunit PaaK | 0.28 | TX73_024395 | | LysR substrate-binding domain-containing protein | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF1689 | | Phenylacetate-CoA oxygenase/reductase, PaaK subunit | 0.24 | GFF5194 | | Nitrogen assimilation regulatory protein Nac | low | > 90 |
| Dinoroseobacter shibae DFL-12 | 0.15 | Dshi_3822 | | phenylacetate-CoA oxygenase/reductase, PaaK subunit (RefSeq) | 0.24 | Dshi_1431 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
| Acinetobacter radioresistens SK82 | 0.14 | MPMX26_01556 | | 1,2-phenylacetyl-CoA epoxidase, subunit E | 0.30 | MPMX26_00849 | | HTH-type transcriptional regulator GltC | — | — |
| Variovorax sp. OAS795 | 0.14 | ABID97_RS22805 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaE | 0.30 | ABID97_RS18700 | | LysR substrate-binding domain-containing protein | low | > 91 |
Not shown: 42 genomes with orthologs for Psyr_4775 only; 6 genomes with orthologs for Psyr_2180 only