Conservation of cofitness between Psyr_4088 and Psyr_1864 in Pseudomonas syringae pv. syringae B728a

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4088 ketopantoate reductase 1.0 Psyr_1864 spermidine synthase 0.32 15
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4088 ketopantoate reductase 1.00 Psyr_1864 spermidine synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03645 2-dehydropantoate 2-reductase 0.89 AO353_02195 spermidine synthase low > 101
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.90 PfGW456L13_4155 Spermidine synthase (EC 2.5.1.16) low > 87
Pseudomonas sp. S08-1 0.60 OH686_08220 2-dehydropantoate 2-reductase 0.88 OH686_03215 spermidine synthase low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_1140 2-dehydropantoate 2-reductase 0.82 Psest_1911 spermidine synthase low > 67
Enterobacter sp. TBS_079 0.22 MPMX20_01016 2-dehydropantoate 2-reductase 0.58 MPMX20_00815 Polyamine aminopropyltransferase low > 85
Serratia liquefaciens MT49 0.22 IAI46_04950 2-dehydropantoate 2-reductase 0.63 IAI46_21290 polyamine aminopropyltransferase low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.58 EX28DRAFT_3718 spermidine synthase low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS06405 2-dehydropantoate 2-reductase 0.59 BWI76_RS04925 spermidine synthase low > 92
Marinobacter adhaerens HP15 0.21 HP15_1312 2-dehydropantoate 2-reductase 0.29 HP15_273 spermidine synthase low > 73
Dickeya dianthicola ME23 0.21 DZA65_RS05940 2-dehydropantoate 2-reductase 0.61 DZA65_RS17215 polyamine aminopropyltransferase low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.59 ECOLIN_RS00675 polyamine aminopropyltransferase low > 55
Escherichia coli ECRC98 0.20 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.59 JDDGAC_14060 speE polyamine aminopropyltransferase low > 86
Escherichia coli ECRC99 0.20 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.59 KEDOAH_17690 speE polyamine aminopropyltransferase — —
Escherichia coli ECRC101 0.20 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.59 MCAODC_00980 speE polyamine aminopropyltransferase 0.61 74
Escherichia coli ECRC100 0.20 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.59 OKFHMN_10465 speE polyamine aminopropyltransferase 0.70 22
Escherichia coli ECOR38 0.20 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.59 HEPCGN_08445 speE polyamine aminopropyltransferase low > 87
Escherichia coli ECRC102 0.20 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.59 NIAGMN_08315 speE polyamine aminopropyltransferase — —
Escherichia coli BW25113 0.20 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.59 b0121 speE spermidine synthase (NCBI) low > 76
Rahnella sp. WP5 0.20 EX31_RS22180 2-dehydropantoate 2-reductase 0.61 EX31_RS03375 polyamine aminopropyltransferase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.59 OHPLBJKB_03540 Polyamine aminopropyltransferase low > 73
Dickeya dadantii 3937 0.20 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.62 DDA3937_RS16010 polyamine aminopropyltransferase low > 74
Escherichia coli ECRC62 0.20 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.59 BNILDI_08800 speE polyamine aminopropyltransferase 0.63 60
Escherichia fergusonii Becca 0.20 EFB2_03632 2-dehydropantoate 2-reductase 0.59 EFB2_03924 Polyamine aminopropyltransferase low > 86
Erwinia tracheiphila SCR3 0.20 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.61 LU632_RS20150 speE polyamine aminopropyltransferase low > 74
Escherichia coli BL21 0.20 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.59 ECD_00120 spermidine synthase (putrescine aminopropyltransferase) low > 61
Escherichia coli ECOR27 0.20 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.59 NOLOHH_02810 speE polyamine aminopropyltransferase low > 75
Dickeya dianthicola 67-19 0.20 HGI48_RS05615 2-dehydropantoate 2-reductase 0.62 HGI48_RS16130 polyamine aminopropyltransferase 0.79 26
Pantoea sp. MT58 0.20 IAI47_14715 2-dehydropantoate 2-reductase 0.61 IAI47_15710 polyamine aminopropyltransferase low > 76
Pectobacterium carotovorum WPP14 0.19 HER17_RS15910 2-dehydropantoate 2-reductase 0.64 HER17_RS05505 polyamine aminopropyltransferase low > 75
Shewanella amazonensis SB2B 0.18 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.61 Sama_1964 spermidine synthase (RefSeq) — —
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.24 RR42_RS17580 spermidine synthase low > 128
Methanococcus maripaludis S2 0.13 MMP_RS03525 ketopantoate reductase family protein 0.33 MMP_RS08145 polyamine aminopropyltransferase — —

Not shown: 15 genomes with orthologs for Psyr_4088 only; 16 genomes with orthologs for Psyr_1864 only