Conservation of cofitness between PP_1070 and PP_5275 in Pseudomonas putida KT2440

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1070 glutamate / aspartate ABC transporter - permease subunit 1.0 PP_5275 putative regulator 0.15 15
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS05640 amino acid ABC transporter permease 0.79 PFLU_RS29405 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25 0.95 PFLU_RS05640 amino acid ABC transporter permease 0.79 PFLU_RS29405 PLP-dependent aminotransferase family protein low > 109
Pseudomonas simiae WCS417 0.94 PS417_05555 amino acid ABC transporter permease 0.80 PS417_27730 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_18225 amino acid ABC transporter permease 0.80 AO356_12595 GntR family transcriptional regulator low > 104
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_3909 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein 0.77 Psyr_0230 transcriptional regulator, GntR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_3909 L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein 0.77 Psyr_0230 transcriptional regulator, GntR family low > 86
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5569 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) 0.80 Pf6N2E2_4386 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.19 35
Pseudomonas sp. RS175 0.90 PFR28_03372 Glutamate/aspartate import permease protein GltJ 0.80 PFR28_04404 HTH-type transcriptional regulator NorG low > 88
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_16285 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) 0.81 AO353_09180 GntR family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_4771 ABC transporter for L-Asparagine and possibly other L-amino acids, permease component 1 (from data) 0.82 PfGW456L13_807 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_772 ABC transporter for L-asparagine and L-glutamate, permease component 1 (from data) 0.81 Pf1N1B4_2139 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas sp. S08-1 0.84 OH686_13345 Glutamate/aspartate ABC transporter, permease protein GltJ 0.71 OH686_13665 DNA-binding transcriptional regulator, MocR family / aminotransferase domain 0.87 14
Dickeya dianthicola ME23 0.59 DZA65_RS06610 amino acid ABC transporter permease 0.54 DZA65_RS01185 PLP-dependent aminotransferase family protein low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS06265 amino acid ABC transporter permease 0.55 HGI48_RS01115 PLP-dependent aminotransferase family protein 0.44 43
Pectobacterium carotovorum WPP14 0.59 HER17_RS15195 amino acid ABC transporter permease 0.62 HER17_RS20410 PLP-dependent aminotransferase family protein low > 75
Rahnella sp. WP5 0.59 EX31_RS23170 amino acid ABC transporter permease 0.66 EX31_RS11565 PLP-dependent aminotransferase family protein low > 89
Dickeya dadantii 3937 0.58 DDA3937_RS06220 amino acid ABC transporter permease 0.56 DDA3937_RS01120 PLP-dependent aminotransferase family protein low > 74
Escherichia coli ECRC99 0.58 KEDOAH_20710 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 KEDOAH_16695 yjiR Uncharacterized HTH-type transcriptional regulator YjiR
Escherichia coli ECRC98 0.58 JDDGAC_10905 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 JDDGAC_15045 yjiR Uncharacterized HTH-type transcriptional regulator YjiR low > 86
Enterobacter sp. TBS_079 0.58 MPMX20_01305 Glutamate/aspartate import permease protein GltJ 0.56 MPMX20_00609 HTH-type transcriptional regulator NorG low > 85
Escherichia coli ECRC102 0.58 NIAGMN_05315 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 NIAGMN_09300 yjiR Uncharacterized HTH-type transcriptional regulator YjiR
Escherichia coli ECRC101 0.58 MCAODC_26475 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 MCAODC_01965 yjiR Uncharacterized HTH-type transcriptional regulator YjiR low > 87
Klebsiella michiganensis M5al 0.58 BWI76_RS08105 glutamate/aspartate ABC transporter permease GltJ 0.54 BWI76_RS03690 transcriptional regulator, GntR family/aminotransferase family protein low > 92
Escherichia coli ECRC100 0.58 OKFHMN_07260 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 OKFHMN_11450 yjiR Uncharacterized HTH-type transcriptional regulator YjiR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03059 putative glutamine ABC transporter permease protein GlnM 0.55 OHPLBJKB_03726 Histidinol-phosphate aminotransferase low > 73
Escherichia coli BW25113 0.58 b0654 gltJ glutamate and aspartate transporter subunit (NCBI) 0.55 b4340 yjiR fused predicted DNA-binding transcriptional regulator/predicted aminotransferase (NCBI) low > 76
Serratia liquefaciens MT49 0.58 IAI46_05990 amino acid ABC transporter permease 0.71 IAI46_07315 PLP-dependent aminotransferase family protein low > 86
Escherichia coli ECRC62 0.58 BNILDI_21655 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 BNILDI_07805 yjiR Uncharacterized HTH-type transcriptional regulator YjiR low > 75
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2317 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.56 EX28DRAFT_3511 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 76
Escherichia coli ECOR27 0.58 NOLOHH_23645 gltJ glutamate/aspartate ABC transporter permease GltJ 0.55 NOLOHH_03790 yjiR Uncharacterized HTH-type transcriptional regulator YjiR low > 75
Escherichia coli Nissle 1917 0.57 ECOLIN_RS03520 glutamate/aspartate ABC transporter permease GltJ 0.55 ECOLIN_RS24935 PLP-dependent aminotransferase family protein low > 55
Pantoea sp. MT58 0.57 IAI47_13975 amino acid ABC transporter permease 0.63 IAI47_18095 PLP-dependent aminotransferase family protein low > 76
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1956 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) 0.34 Ac3H11_4726 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 79

Not shown: 25 genomes with orthologs for PP_1070 only; 0 genomes with orthologs for PP_5275 only