Conservation of cofitness between PP_3721 and PP_5003 in Pseudomonas putida KT2440

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3721 arginine:pyruvate transaminase AruH (EC 2.6.1.84) (from data) 1.0 PP_5003 poly(3-hydroxyalkanoate) polymerase 1 0.17 16
Pseudomonas sp. BP01 0.93 JOY50_RS08090 pyridoxal phosphate-dependent aminotransferase 0.96 JOY50_RS09675 phaC class II poly(R)-hydroxyalkanoic acid synthase low > 84
Pseudomonas sp. SVBP6 0.85 COO64_RS20990 pyridoxal phosphate-dependent aminotransferase 0.88 COO64_RS13550 phaC class II poly(R)-hydroxyalkanoic acid synthase low > 93
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_24850 aspartate aminotransferase 0.87 AO353_12415 poly(R)-hydroxyalkanoic acid synthase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_3206 Aspartate aminotransferase (EC 2.6.1.1) 0.85 PfGW456L13_292 Polyhydroxyalkanoic acid synthase low > 87
Pseudomonas aeruginosa PA14 0.80 IKLFDK_28660 Arginine--pyruvate transaminase AruH 0.82 IKLFDK_28245 class II poly(R)-hydroxyalkanoic acid synthase low > 98
Pseudomonas aeruginosa PUPa3 0.80 DQ20_RS51385 aruH;inference=COORDINATES arginine--pyruvate transaminase AruH 0.82 DQ20_RS50975 phaC;go_function=acyltransferase class II poly(R)-hydroxyalkanoic acid synthase low > 101
Pseudomonas aeruginosa MRSN321 0.80 DY961_RS10675 aruH;inference=COORDINATES arginine--pyruvate transaminase AruH 0.82 DY961_RS11105 phaC;go_function=acyltransferase class II poly(R)-hydroxyalkanoic acid synthase low > 100
Pseudomonas sp. RS175 0.74 PFR28_02468 Arginine--pyruvate transaminase AruH 0.85 PFR28_04996 Poly(3-hydroxyalkanoate) polymerase subunit PhaC low > 88
Pseudomonas sp. DMC3 0.74 GFF2929 Arginine--pyruvate transaminase AruH 0.85 GFF3083 Poly(3-hydroxyalkanoate) polymerase subunit PhaC low > 89
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_462 Aspartate aminotransferase (EC 2.6.1.1) 0.85 Pf6N2E2_3772 Polyhydroxyalkanoic acid synthase low > 103
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_22880 aspartate aminotransferase 0.85 AO356_09470 poly(R)-hydroxyalkanoic acid synthase low > 104
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_4996 Aspartate aminotransferase (EC 2.6.1.1) 0.85 Pf1N1B4_1555 Polyhydroxyalkanoic acid synthase low > 87
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS27000 aspartate aminotransferase 0.29 BPHYT_RS09145 poly-beta-hydroxybutyrate polymerase low > 109
Ralstonia solanacearum GMI1000 0.28 RS_RS23085 pyridoxal phosphate-dependent aminotransferase 0.30 RS_RS08220 class I poly(R)-hydroxyalkanoic acid synthase low > 80
Rhizobium sp. OAE497 0.27 ABIE40_RS21035 pyridoxal phosphate-dependent aminotransferase 0.28 ABIE40_RS08635 class I poly(R)-hydroxyalkanoic acid synthase low > 107
Variovorax sp. SCN45 0.26 GFF621 Aspartate aminotransferase (EC 2.6.1.1) 0.29 GFF808 Polyhydroxyalkanoic acid synthase low > 127
Ralstonia solanacearum PSI07 0.26 RPSI07_RS05665 pyridoxal phosphate-dependent aminotransferase 0.30 RPSI07_RS15985 class I poly(R)-hydroxyalkanoic acid synthase low > 81
Ralstonia solanacearum UW163 0.26 UW163_RS21205 pyridoxal phosphate-dependent aminotransferase 0.30 UW163_RS14815 class I poly(R)-hydroxyalkanoic acid synthase — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS17935 pyridoxal phosphate-dependent aminotransferase 0.30 RALBFv3_RS01505 class I poly(R)-hydroxyalkanoic acid synthase low > 76
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS35305 aspartate aminotransferase 0.29 RR42_RS07605 poly-beta-hydroxybutyrate polymerase low > 128
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1602 Aspartate aminotransferase (EC 2.6.1.1) 0.30 Ac3H11_2304 Polyhydroxyalkanoic acid synthase low > 79
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS21080 pyridoxal phosphate-dependent aminotransferase 0.87 PFLU_RS01950 class II poly(R)-hydroxyalkanoic acid synthase low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS21080 pyridoxal phosphate-dependent aminotransferase 0.87 PFLU_RS01950 class II poly(R)-hydroxyalkanoic acid synthase low > 109
Magnetospirillum magneticum AMB-1 0.24 AMB_RS02875 pyridoxal phosphate-dependent aminotransferase 0.30 AMB_RS18850 class I poly(R)-hydroxyalkanoic acid synthase — —
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_01711 Aspartate/prephenate aminotransferase 0.87 GEMAOFIL_00614 Poly(3-hydroxyalkanoate) polymerase subunit PhaC low > 96

Not shown: 51 genomes with orthologs for PP_3721 only; 8 genomes with orthologs for PP_5003 only