Conservation of cofitness between PP_3926 and PP_4948 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3926 short-chain dehydrogenase 1.0 PP_4948 Acyl-CoA dehydrogenase family protein 0.17 5
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_3499 Short-chain dehydrogenase/reductase SDR 0.82 PfGW456L13_224 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_21495 short-chain dehydrogenase 0.84 AO353_12805 acyl-CoA dehydrogenase low > 101
Pseudomonas sp. RS175 0.93 PFR28_02397 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.81 PFR28_05052 3-methylmercaptopropionyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_23325 short-chain dehydrogenase 0.83 AO356_09020 acyl-CoA dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_544 Short-chain dehydrogenase/reductase SDR 0.83 Pf6N2E2_3686 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 103
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS17045 SDR family oxidoreductase 0.83 PFLU_RS02225 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.93 PFLU_RS17045 SDR family oxidoreductase 0.83 PFLU_RS02225 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4527 Short-chain dehydrogenase/reductase SDR 0.83 Pf1N1B4_1490 Acyl-CoA dehydrogenase (EC 1.3.8.7) low > 87
Pseudomonas simiae WCS417 0.93 PS417_15030 short-chain dehydrogenase 0.84 PS417_02170 acyl-CoA dehydrogenase low > 88
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_2456 Short-chain dehydrogenase/reductase SDR 0.83 Psyr_0505 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_2456 Short-chain dehydrogenase/reductase SDR 0.83 Psyr_0505 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region — —
Pseudomonas sp. S08-1 0.88 OH686_03515 Oxidoreductase, short-chain dehydrogenase/reductase family 0.79 OH686_09785 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) low > 80
Pseudomonas stutzeri RCH2 0.87 Psest_2081 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.80 Psest_0399 Acyl-CoA dehydrogenases low > 67
Alteromonas macleodii MIT1002 0.68 MIT1002_02274 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.53 MIT1002_02276 Acyl-CoA dehydrogenase low > 70
Marinobacter adhaerens HP15 0.67 HP15_825 short-chain dehydrogenase/reductase SDR 0.56 HP15_2576 acyl-CoA dehydrogenase domain protein low > 73
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS21885 SDR family oxidoreductase 0.54 ABZR87_RS12570 acyl-CoA dehydrogenase low > 80
Shewanella loihica PV-4 0.65 Shew_2862 short chain dehydrogenase (RefSeq) 0.56 Shew_2868 acyl-CoA dehydrogenase domain-containing protein (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS28985 short-chain dehydrogenase 0.52 RR42_RS11075 acyl-CoA dehydrogenase low > 128
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3445 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.43 Ac3H11_2520 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF1559 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.43 GFF4595 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) low > 90
Variovorax sp. SCN45 0.29 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family 0.43 GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) low > 127

Not shown: 17 genomes with orthologs for PP_3926 only; 5 genomes with orthologs for PP_4948 only