Conservation of cofitness between PP_1824 and PP_2933 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1824 Smr domain protein 1.0 PP_2933 GSH-dependent disulfide bond oxidoreductase 0.23 11
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5816 Smr domain protein 0.85 Pf6N2E2_1619 Glutathione S-transferase (EC 2.5.1.18) low > 103
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_19510 DNA mismatch repair protein MutS 0.85 AO356_23350 S-transferase — —
Pseudomonas fluorescens SBW25 0.86 PFLU_RS21310 Smr/MutS family protein 0.75 PFLU_RS11695 glutathione-dependent disulfide-bond oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS21310 Smr/MutS family protein 0.75 PFLU_RS11695 glutathione-dependent disulfide-bond oxidoreductase low > 109
Pseudomonas sp. RS175 0.85 PFR28_03132 putative DNA endonuclease SmrA 0.83 PFR28_01980 Disulfide-bond oxidoreductase YghU low > 88
Pseudomonas simiae WCS417 0.84 PS417_19345 DNA mismatch repair protein MutS 0.75 PS417_11065 S-transferase — —
Pseudomonas stutzeri RCH2 0.83 Psest_1993 Uncharacterized protein conserved in bacteria 0.74 Psest_0056 Glutathione S-transferase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1847 Smr protein/MutS2 C-terminal 0.80 Psyr_0609 Glutathione S-transferase, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1847 Smr protein/MutS2 C-terminal 0.80 Psyr_0609 Glutathione S-transferase, C-terminal — —
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1926 Uncharacterized protein conserved in bacteria 0.70 B158DRAFT_0016 Glutathione S-transferase low > 40
Marinobacter adhaerens HP15 0.29 HP15_1255 protein containing Smr protein/MutS2 C-terminal domain 0.71 HP15_3834 glutathione S-transferase YghU low > 73
Alteromonas macleodii MIT1002 0.26 MIT1002_01029 putative DNA endonuclease SmrA 0.67 MIT1002_00457 Disulfide-bond oxidoreductase YghU low > 70
Rahnella sp. WP5 0.24 EX31_RS07180 DNA endonuclease SmrA 0.71 EX31_RS19830 glutathione-dependent disulfide-bond oxidoreductase low > 89
Dickeya dianthicola ME23 0.23 DZA65_RS12625 DNA endonuclease SmrA 0.68 DZA65_RS07885 glutathione-dependent disulfide-bond oxidoreductase low > 75
Dickeya dadantii 3937 0.23 DDA3937_RS12085 DNA endonuclease SmrA 0.70 DDA3937_RS07505 glutathione-dependent disulfide-bond oxidoreductase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF2654 FIG00638524: hypothetical protein 0.71 GFF3098 Uncharacterized GST-like protein yghU associated with glutathionylspermidine synthetase/amidase low > 78
Klebsiella michiganensis M5al 0.22 BWI76_RS16155 hypothetical protein 0.68 BWI76_RS24255 thiol:disulfide oxidoreductase — —
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3133.1 ortholog of Bordetella pertussis (BX470248) BP2475 0.32 Xcc-8004.5030.1 Glutathione S-transferase (EC 2.5.1.18) low > 74
Escherichia coli Nissle 1917 0.22 ECOLIN_RS08040 DNA endonuclease SmrA 0.70 ECOLIN_RS17225 glutathione-dependent disulfide-bond oxidoreductase low > 52
Escherichia coli ECRC99 0.21 KEDOAH_26565 smrA DNA endonuclease SmrA 0.70 KEDOAH_09095 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC98 0.21 JDDGAC_04750 smrA DNA endonuclease SmrA 0.70 JDDGAC_22685 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECOR27 0.21 NOLOHH_19905 smrA DNA endonuclease SmrA 0.70 NOLOHH_10830 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECOR38 0.21 HEPCGN_25970 smrA DNA endonuclease SmrA 0.70 HEPCGN_17905 yghU glutathione-dependent disulfide-bond oxidoreductase low > 85
Escherichia coli ECRC62 0.21 BNILDI_18055 smrA DNA endonuclease SmrA 0.70 BNILDI_00685 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC101 0.21 OKFHMN_02190 smrA DNA endonuclease SmrA 0.70 OKFHMN_19050 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia fergusonii Becca 0.21 EFB2_02588 putative DNA endonuclease SmrA 0.70 EFB2_00818 Disulfide-bond oxidoreductase YghU low > 86
Escherichia coli ECRC102 0.21 NIAGMN_26360 smrA DNA endonuclease SmrA 0.70 NIAGMN_16815 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli ECRC101 0.21 MCAODC_16065 smrA DNA endonuclease SmrA 0.70 MCAODC_09565 yghU glutathione-dependent disulfide-bond oxidoreductase — —
Escherichia coli BW25113 0.21 b1340 ydaL hypothetical protein (NCBI) 0.70 b2989 b2989 orf, hypothetical protein (VIMSS) — —
Escherichia coli BL21 0.21 ECD_01317 DNA endonuclease 0.70 ECD_02865 putative S-transferase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02342 putative DNA endonuclease SmrA 0.70 OHPLBJKB_00710 Disulfide-bond oxidoreductase YghU low > 73
Shewanella loihica PV-4 0.21 Shew_2418 hypothetical protein (RefSeq) 0.67 Shew_2458 glutathione S-transferase domain-containing protein (RefSeq) low > 60
Enterobacter asburiae PDN3 0.21 EX28DRAFT_1533 Uncharacterized protein conserved in bacteria 0.71 EX28DRAFT_3028 Glutathione S-transferase low > 76
Pectobacterium carotovorum WPP14 0.21 HER17_RS06925 endonuclease SmrB 0.78 HER17_RS13875 glutathione-dependent disulfide-bond oxidoreductase low > 75
Enterobacter sp. TBS_079 0.20 MPMX20_02041 putative DNA endonuclease SmrA 0.72 MPMX20_03842 Disulfide-bond oxidoreductase YghU low > 85
Dickeya dianthicola 67-19 0.18 HGI48_RS14540 endonuclease SmrB 0.69 HGI48_RS07375 glutathione-dependent disulfide-bond oxidoreductase low > 71

Not shown: 17 genomes with orthologs for PP_1824 only; 10 genomes with orthologs for PP_2933 only