Conservation of cofitness between PP_2406 and PP_2554 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2406 putative quinate/shikimate dehydrogenase 1.0 PP_2554 putative 3-dehydroshikimate dehydratase 0.28 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_2132 shikimate dehydrogenase 0.82 Psyr_2130 4-hydroxyphenylpyruvate dioxygenase low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_2132 shikimate dehydrogenase 0.82 Psyr_2130 4-hydroxyphenylpyruvate dioxygenase low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_06175 shikimate dehydrogenase 0.82 AO353_06185 4-hydroxyphenylpyruvate dioxygenase low > 101
Pseudomonas sp. RS175 0.73 PFR28_03811 Quinate/shikimate dehydrogenase (NAD(+)) 0.81 PFR28_03813 hypothetical protein 0.89 2
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5061 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.82 Pf6N2E2_5058 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) low > 103
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1427 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.82 PfGW456L13_1425 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) low > 87
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2749 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) 0.83 Pf1N1B4_2747 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) low > 87
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_15590 shikimate dehydrogenase 0.82 AO356_15580 4-hydroxyphenylpyruvate dioxygenase low > 104
Pseudomonas fluorescens SBW25 0.70 PFLU_RS26360 shikimate dehydrogenase 0.84 PFLU_RS26370 TIM barrel protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS26360 shikimate dehydrogenase 0.84 PFLU_RS26370 TIM barrel protein 0.44 1
Pseudomonas simiae WCS417 0.69 PS417_24435 shikimate dehydrogenase 0.84 PS417_24445 4-hydroxyphenylpyruvate dioxygenase low > 88
Azospirillum sp. SherDot2 0.57 MPMX19_03526 Quinate/shikimate dehydrogenase (NAD(+)) 0.50 MPMX19_03524 hypothetical protein low > 112
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS22685 shikimate 5-dehydrogenase 0.55 BPHYT_RS22675 4-hydroxyphenylpyruvate dioxygenase low > 109
Ralstonia solanacearum PSI07 0.53 RPSI07_RS06205 shikimate dehydrogenase 0.47 RPSI07_RS06215 3-keto-5-aminohexanoate cleavage protein low > 81
Paraburkholderia graminis OAS925 0.53 ABIE53_004075 shikimate dehydrogenase 0.56 ABIE53_004077 4-hydroxyphenylpyruvate dioxygenase 0.79 3
Sinorhizobium meliloti 1021 0.51 SM_b20037 shikimate 5-dehydrogenase 0.43 SM_b20581 4-hydroxyphenylpyruvate dioxygenase low > 103
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_03216 shikimate dehydrogenase (EC 1.1.1.25) 0.56 H281DRAFT_03214 4-hydroxyphenylpyruvate dioxygenase low > 103
Ralstonia solanacearum GMI1000 0.50 RS_RS23870 shikimate dehydrogenase 0.46 RS_RS23880 3-keto-5-aminohexanoate cleavage protein low > 80
Ralstonia solanacearum UW163 0.48 UW163_RS21705 shikimate dehydrogenase 0.46 UW163_RS21715 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS17445 shikimate dehydrogenase 0.46 RALBFv3_RS17435 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein low > 76
Agrobacterium fabrum C58 0.46 Atu4532 shikimate 5-dehydrogenase 0.40 Atu4529 hypothetical protein 0.66 1
Bosea sp. OAE506 0.31 ABIE41_RS20015 shikimate dehydrogenase 0.43 ABIE41_RS20050 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein low > 77

Not shown: 20 genomes with orthologs for PP_2406 only; 6 genomes with orthologs for PP_2554 only