Conservation of cofitness between PP_1778 and PP_1803 in Pseudomonas putida KT2440

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1778 Lipopolysaccharide ABC export system, permease protein 1.0 PP_1803 UDP-sugar epimerase 0.53 14
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_0917 ABC-2 0.54 Psyr_3638 UDP-glucose 4-epimerase, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_0917 ABC-2 0.54 Psyr_3638 UDP-glucose 4-epimerase, putative low > 86
Azospirillum brasilense Sp245 0.60 AZOBR_RS33925 ABC transporter 0.39 AZOBR_RS09095 NAD-dependent dehydratase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_01668 hypothetical protein 0.12 OHPLBJKB_00723 2-alkyl-3-oxoalkanoate reductase low > 73
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_11825 ABC transporter 0.36 AO356_03355 hypothetical protein 0.51 8
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_10255 ABC transporter 0.62 AO353_01980 NAD-dependent dehydratase 0.37 31
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1963 O-antigen export system permease protein RfbD 0.54 Pf1N1B4_339 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.56 4
Pseudomonas sp. S08-1 0.37 OH686_11970 O-antigen export system permease protein RfbD 0.53 OH686_20905 UDP-glucose 4-epimerase 0.99 6
Paraburkholderia graminis OAS925 0.25 ABIE53_001154 lipopolysaccharide transport system permease protein 0.39 ABIE53_001161 nucleoside-diphosphate-sugar epimerase 0.39 15
Magnetospirillum magneticum AMB-1 0.24 AMB_RS05435 ABC transporter permease 0.40 AMB_RS00195 nucleoside-diphosphate sugar epimerase — —
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04827 lipopolysaccharide transport system permease protein 0.39 H281DRAFT_04849 UDP-glucose 4-epimerase — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS25730 ABC transporter permease 0.39 QEN71_RS25600 SDR family oxidoreductase 0.53 63
Bosea sp. OAE506 0.23 ABIE41_RS03025 ABC transporter permease 0.24 ABIE41_RS03860 NAD-dependent epimerase/dehydratase family protein — —
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS21440 sugar ABC transporter permease 0.42 BPHYT_RS04375 epimerase — —
Azospirillum sp. SherDot2 0.20 MPMX19_06721 hypothetical protein 0.44 MPMX19_01806 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase — —
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1126 ABC transporter permease protein 0.11 Synpcc7942_1826 mRNA-binding protein low > 38
Serratia liquefaciens MT49 0.19 IAI46_08125 ABC transporter permease 0.14 IAI46_15590 NAD-dependent epimerase/dehydratase family protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS01800 ABC transporter permease 0.17 CA265_RS19215 nucleoside-diphosphate-sugar epimerase low > 88
Castellaniella sp019104865 MT123 0.17 ABCV34_RS12950 ABC transporter permease 0.34 ABCV34_RS13025 NAD-dependent epimerase/dehydratase family protein low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.17 Echvi_2592 ABC-type polysaccharide/polyol phosphate export systems, permease component 0.12 Echvi_4391 Nucleoside-diphosphate-sugar epimerases low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF1845 O-antigen export system, permease protein 0.48 GFF1863 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 90
Escherichia coli BL21 0.11 ECD_02828 Polysialic acid transport protein kpsM 0.12 ECD_02852 hypothetical protein low > 60
Escherichia coli Nissle 1917 0.11 ECOLIN_RS17035 ABC transporter permease 0.12 ECOLIN_RS17160 NAD-dependent epimerase/dehydratase family protein — —
Escherichia coli ECOR38 0.11 HEPCGN_18100 kpsM Polysialic acid transport protein 0.12 HEPCGN_17975 wcaG short-chain dehydrogenase low > 85
Escherichia fergusonii Becca 0.11 EFB2_00855 Polysialic acid transport protein KpsM 0.12 EFB2_00831 2-alkyl-3-oxoalkanoate reductase low > 86
Dickeya dadantii 3937 0.10 DDA3937_RS18670 ABC transporter permease 0.45 DDA3937_RS03415 NAD-dependent epimerase/dehydratase family protein low > 74

Not shown: 19 genomes with orthologs for PP_1778 only; 22 genomes with orthologs for PP_1803 only