Conservation of cofitness between PP_4015 and PP_1191 in Pseudomonas putida KT2440

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4015 HflD-like high frequency lysogenization protein 1.0 PP_1191 S4 domain protein 0.18 9
Pseudomonas sp. RS175 0.86 PFR28_02620 High frequency lysogenization protein HflD 0.60 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.53 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 103
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_22105 DNA repair protein 0.60 AO356_05610 RNA-binding protein — —
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_27710 DNA repair protein 0.59 AO353_16865 RNA-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.61 PfGW456L13_4655 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 87
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_4047 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.60 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 87
Pseudomonas simiae WCS417 0.83 PS417_16545 DNA repair protein 0.59 PS417_05870 RNA-binding protein S4 — —
Pseudomonas fluorescens SBW25 0.83 PFLU_RS18585 high frequency lysogenization protein HflD 0.59 PFLU_RS05940 RNA-binding protein S4 0.49 103
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS18585 high frequency lysogenization protein HflD 0.59 PFLU_RS05940 RNA-binding protein S4 low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_3191 Protein of unknown function DUF489 0.57 Psyr_1390 RNA-binding S4 low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_3191 Protein of unknown function DUF489 0.57 Psyr_1390 RNA-binding S4 low > 86
Pseudomonas sp. S08-1 0.79 OH686_00205 High frequency lysogenization protein HflD 0.45 OH686_05400 Pseudouridine synthase low > 80
Pseudomonas stutzeri RCH2 0.77 Psest_2020 Uncharacterized protein involved in purine metabolism 0.44 Psest_2917 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases low > 67
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_06870 hflD high frequency lysogenization protein HflD 0.46 OKGIIK_04535 rsuA RNA-binding protein low > 52
Rhodanobacter denitrificans MT42 0.29 LRK55_RS00180 high frequency lysogenization protein HflD 0.46 LRK55_RS15640 rRNA pseudouridine synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS00440 high frequency lysogenization protein HflD 0.46 LRK54_RS15885 rRNA pseudouridine synthase low > 59
Lysobacter sp. OAE881 0.26 ABIE51_RS11515 high frequency lysogenization protein HflD 0.49 ABIE51_RS13020 rRNA pseudouridine synthase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.2759.1 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.48 Xcc-8004.1469.1 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 74
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS02180 high frequency lysogenization protein HflD 0.49 ABZR86_RS18320 rRNA pseudouridine synthase low > 74

Not shown: 34 genomes with orthologs for PP_4015 only; 8 genomes with orthologs for PP_1191 only