Conservation of cofitness between PP_3746 and PP_0496 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3746 glycolate oxidase, putative FAD-binding subunit 1.0 PP_0496 Sodium/alanine symporter 0.15 17
Pseudomonas stutzeri RCH2 0.70 Psest_3840 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.62 Psest_4077 amino acid carrier protein low > 67
Pseudomonas sp. RS175 0.70 PFR28_02759 hypothetical protein 0.77 PFR28_04500 Amino-acid carrier protein AlsT low > 88
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_01095 glycolate oxidase 0.77 AO356_11095 sodium:alanine symporter low > 104
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_21305 glycolate oxidase 0.75 AO353_09955 sodium:alanine symporter low > 101
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3332 FAD linked oxidase, N-terminal 0.75 Psyr_5052 Sodium:alanine symporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3332 FAD linked oxidase, N-terminal 0.75 Psyr_5052 Sodium:alanine symporter low > 86
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_5863 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.75 Pf1N1B4_2024 sodium/alanine transporter low > 87
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_136 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.77 Pf6N2E2_4086 sodium/alanine transporter low > 103
Escherichia coli Nissle 1917 0.65 ECOLIN_RS17135 glycolate oxidase subunit GlcE 0.34 ECOLIN_RS00040 sodium:alanine symporter family protein low > 52
Escherichia coli ECOR27 0.65 NOLOHH_10925 glcE glycolate oxidase subunit GlcE 0.35 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ low > 57
Escherichia coli ECOR38 0.65 HEPCGN_18000 glcE glycolate oxidase subunit GlcE 0.35 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ low > 85
Escherichia fergusonii Becca 0.65 EFB2_00836 hypothetical protein 0.35 EFB2_04036 Amino-acid carrier protein AlsT 0.59 3
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00728 hypothetical protein 0.35 OHPLBJKB_03653 Amino-acid carrier protein AlsT low > 73
Escherichia coli BW25113 0.65 b4468 glcE glycolate oxidase FAD binding subunit (NCBI) 0.35 b0007 yaaJ predicted transporter (NCBI) low > 76
Escherichia coli ECRC62 0.64 BNILDI_00590 glcE glycolate oxidase subunit GlcE 0.35 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ — —
Escherichia coli BL21 0.64 ECD_02847 glycolate oxidase FAD binding subunit 0.35 ECD_00007 putative transporter low > 60
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS38020 glycolate oxidase subunit GlcE 0.20 QEN71_RS14800 amino acid carrier protein low > 153
Marinobacter adhaerens HP15 0.41 HP15_3023 glycolate oxidase FAD binding subunit 0.23 HP15_3907 sodium/alanine symporter family protein low > 73
Castellaniella sp019104865 MT123 0.40 ABCV34_RS06810 glycolate oxidase subunit GlcE 0.23 ABCV34_RS11085 sodium:alanine symporter family protein 0.89 12
Sinorhizobium meliloti 1021 0.28 SMc00833 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.37 SMc04263 amino acid carrier transmembrane protein low > 103
Dinoroseobacter shibae DFL-12 0.24 Dshi_2895 FAD linked oxidase domain protein (RefSeq) 0.21 Dshi_1808 amino acid carrier protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.22 PGA1_c29710 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.27 PGA1_78p00280 putative sodium/alanine symporter low > 62

Not shown: 21 genomes with orthologs for PP_3746 only; 34 genomes with orthologs for PP_0496 only