Conservation of cofitness between PP_1778 and PP_0396 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1778 Lipopolysaccharide ABC export system, permease protein 1.0 PP_0396 conserved protein of unknown function 0.52 17
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_0917 ABC-2 0.89 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_0917 ABC-2 0.89 Psyr_4632 Protein of unknown function DUF444 low > 86
Azospirillum brasilense Sp245 0.60 AZOBR_RS33925 ABC transporter 0.39 AZOBR_RS12650 hypothetical protein low > 97
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_01668 hypothetical protein 0.56 OHPLBJKB_01948 hypothetical protein low > 73
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_11825 ABC transporter 0.89 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_2336 O-antigen export system permease protein RfbD 0.89 PfGW456L13_1195 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4240 O-antigen export system permease protein RfbD 0.89 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 103
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_10255 ABC transporter 0.89 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1963 O-antigen export system permease protein RfbD 0.89 Pf1N1B4_2522 FIG002076: hypothetical protein 0.53 5
Pseudomonas sp. S08-1 0.37 OH686_11970 O-antigen export system permease protein RfbD 0.87 OH686_15015 UPF0229 protein YeaH low > 80
Pseudomonas sp. RS175 0.36 PFR28_04556 hypothetical protein 0.89 PFR28_04069 hypothetical protein low > 88
Paraburkholderia graminis OAS925 0.25 ABIE53_001154 lipopolysaccharide transport system permease protein 0.56 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) low > 113
Rahnella sp. WP5 0.25 EX31_RS11480 ABC transporter permease 0.56 EX31_RS06255 YeaH/YhbH family protein low > 89
Magnetospirillum magneticum AMB-1 0.24 AMB_RS05435 ABC transporter permease 0.43 AMB_RS10890 hypothetical protein low > 64
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04827 lipopolysaccharide transport system permease protein 0.56 H281DRAFT_05233 hypothetical protein — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS25730 ABC transporter permease 0.54 QEN71_RS07380 YeaH/YhbH family protein low > 153
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS21440 sugar ABC transporter permease 0.54 BPHYT_RS11185 hypothetical protein low > 109
Pseudomonas simiae WCS417 0.20 PS417_20640 sugar ABC transporter permease 0.89 PS417_25835 hypothetical protein — —
Azospirillum sp. SherDot2 0.20 MPMX19_06721 hypothetical protein 0.42 MPMX19_02156 hypothetical protein — —
Serratia liquefaciens MT49 0.19 IAI46_08125 ABC transporter permease 0.56 IAI46_14380 YeaH/YhbH family protein — —
Pantoea sp. MT58 0.17 IAI47_07010 ABC transporter permease 0.56 IAI47_08920 YeaH/YhbH family protein low > 76
Erwinia tracheiphila SCR3 0.12 LU632_RS08880 ABC transporter permease 0.55 LU632_RS13015 YeaH/YhbH family protein low > 74
Escherichia coli BL21 0.11 ECD_02828 Polysialic acid transport protein kpsM 0.56 ECD_01753 UPF0229 family protein — —
Escherichia coli Nissle 1917 0.11 ECOLIN_RS17035 ABC transporter permease 0.56 ECOLIN_RS09945 YeaH/YhbH family protein — —
Escherichia fergusonii Becca 0.11 EFB2_00855 Polysialic acid transport protein KpsM 0.56 EFB2_02210 hypothetical protein low > 86
Escherichia coli ECOR38 0.11 HEPCGN_18100 kpsM Polysialic acid transport protein 0.56 HEPCGN_05095 yeaH UPF0229 protein YeaH low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.10 GFF4626 O-antigen export system permease protein RfbD 0.56 GFF3472 UPF0229 protein YeaH — —
Dickeya dadantii 3937 0.10 DDA3937_RS18670 ABC transporter permease 0.54 DDA3937_RS10240 YeaH/YhbH family protein low > 74

Not shown: 17 genomes with orthologs for PP_1778 only; 34 genomes with orthologs for PP_0396 only