Conservation of cofitness between PFLU_RS15475 and PFLU_RS29215 in Pseudomonas fluorescens SBW25

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.0 PFLU_RS29215 response regulator transcription factor 0.70 9
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS15475 TetR/AcrR family transcriptional regulator 1.00 PFLU_RS29215 response regulator transcription factor 0.21 65
Variovorax sp. OAS795 0.59 ABID97_RS26150 TetR/AcrR family transcriptional regulator 0.25 ABID97_RS08200 LytTR family DNA-binding domain-containing protein low > 91
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3383 transcriptional regulator, TetR family 0.21 Ga0059261_0044 two component transcriptional regulator, LytTR family low > 68
Serratia liquefaciens MT49 0.32 IAI46_07070 TetR/AcrR family transcriptional regulator 0.17 IAI46_23615 two-component system response regulator BtsR low > 86
Azospirillum brasilense Sp245 0.31 AZOBR_RS02040 TetR family transcriptional regulator 0.15 AZOBR_RS22560 transcriptional regulator — —
Dickeya dianthicola 67-19 0.31 HGI48_RS05310 TetR/AcrR family transcriptional regulator 0.18 HGI48_RS16465 two-component system response regulator BtsR low > 71
Shewanella sp. ANA-3 0.30 Shewana3_1076 TetR family transcriptional regulator (RefSeq) 0.19 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) low > 73
Shewanella oneidensis MR-1 0.30 SO3494 transcriptional regulator, TetR family (NCBI ptt file) 0.18 SO2823 response regulator (NCBI ptt file) — —
Enterobacter sp. TBS_079 0.29 MPMX20_01792 HTH-type transcriptional repressor ComR 0.17 MPMX20_03092 Transcriptional regulatory protein BtsR low > 85
Escherichia coli BW25113 0.28 b1111 ycfQ orf, hypothetical protein (VIMSS) 0.16 b2125 yehT orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.28 ECD_01107 repressor for bhsA(ycfR) 0.16 ECD_02054 putative response regulator in two-component system withYehU low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_02555 HTH-type transcriptional repressor ComR 0.16 OHPLBJKB_01586 Transcriptional regulatory protein BtsR low > 73
Escherichia coli ECOR27 0.28 NOLOHH_21010 comR TetR family copper-responsive transcriptional repressor ComR 0.16 NOLOHH_15235 btsR two-component system response regulator BtsR low > 75
Escherichia coli Nissle 1917 0.28 ECOLIN_RS06410 TetR family copper-responsive transcriptional repressor ComR 0.16 ECOLIN_RS12450 two-component system response regulator BtsR — —
Escherichia coli ECRC62 0.28 BNILDI_19175 comR TetR family copper-responsive transcriptional repressor ComR 0.16 BNILDI_14185 btsR two-component system response regulator BtsR low > 75
Escherichia coli ECRC98 0.28 JDDGAC_07145 comR TetR family copper-responsive transcriptional repressor ComR 0.16 JDDGAC_28005 btsR two-component system response regulator BtsR low > 86
Escherichia coli ECOR38 0.28 HEPCGN_24000 comR TetR family copper-responsive transcriptional repressor ComR 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR low > 87
Escherichia coli ECRC101 0.28 MCAODC_22845 comR TetR family copper-responsive transcriptional repressor ComR 0.16 MCAODC_21245 btsR two-component system response regulator BtsR low > 87
Escherichia coli ECRC102 0.28 NIAGMN_24345 comR TetR family copper-responsive transcriptional repressor ComR 0.16 NIAGMN_21850 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC99 0.28 KEDOAH_24270 comR TetR family copper-responsive transcriptional repressor ComR 0.16 KEDOAH_04250 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC100 0.28 OKFHMN_03485 comR TetR family copper-responsive transcriptional repressor ComR 0.16 OKFHMN_23915 btsR two-component system response regulator BtsR low > 80
Escherichia fergusonii Becca 0.27 EFB2_02864 HTH-type transcriptional repressor ComR 0.16 EFB2_01731 Transcriptional regulatory protein BtsR low > 86
Pantoea sp. MT58 0.27 IAI47_09720 TetR/AcrR family transcriptional regulator 0.15 IAI47_05560 response regulator transcription factor low > 76
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1819 transcriptional regulator, TetR family 0.16 EX28DRAFT_0437 two component transcriptional regulator, LytTR family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF3394 putative transcriptional repressor 0.16 GFF3820 Two-component response-regulatory protein YehT low > 78
Rahnella sp. WP5 0.26 EX31_RS23895 TetR/AcrR family transcriptional regulator 0.17 EX31_RS00780 two-component system response regulator BtsR low > 89
Klebsiella michiganensis M5al 0.26 BWI76_RS11190 putative TetR/AcrR family transcriptional regulatory protein 0.16 BWI76_RS19470 DNA-binding response regulator low > 92
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_28110 TetR family transcriptional regulator 0.89 AO353_08995 chemotaxis protein CheY low > 101
Shewanella loihica PV-4 0.16 Shew_2729 TetR family transcriptional regulator (RefSeq) 0.14 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) — —
Dickeya dianthicola ME23 0.15 DZA65_RS22680 TetR/AcrR family transcriptional regulator 0.18 DZA65_RS17550 two-component system response regulator BtsR low > 75

Not shown: 9 genomes with orthologs for PFLU_RS15475 only; 51 genomes with orthologs for PFLU_RS29215 only