Conservation of cofitness between PFLU_RS17595 and PFLU_RS28365 in Pseudomonas fluorescens SBW25

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS17595 GDP-mannose pyrophosphatase 1.0 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.51 6
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS17595 GDP-mannose pyrophosphatase 1.00 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas simiae WCS417 0.89 PS417_15610 GDP-mannose pyrophosphatase 0.93 PS417_26720 twitching motility protein PilT low > 88
Enterobacter sp. TBS_079 0.66 MPMX20_02285 GDP-mannose pyrophosphatase NudK 0.43 MPMX20_03808 putative protein YggR low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_1179 nudix-type nucleoside diphosphatase, YffH/AdpP family 0.42 EX28DRAFT_2988 pilus retraction protein PilT low > 76
Klebsiella michiganensis M5al 0.62 BWI76_RS19825 DNA mismatch repair protein MutT 0.40 BWI76_RS24095 twitching motility protein PilT low > 92
Pantoea sp. MT58 0.61 IAI47_09965 NUDIX domain-containing protein 0.42 IAI47_03600 type IV pilus twitching motility protein PilT low > 76
Variovorax sp. OAS795 0.61 ABID97_RS01680 GDP-mannose pyrophosphatase 0.64 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_2669 GDP-mannose pyrophosphatase YffH 0.77 PfGW456L13_1012 Twitching motility protein PilT low > 87
Dickeya dadantii 3937 0.61 DDA3937_RS09935 NUDIX domain-containing protein 0.46 DDA3937_RS17295 type IV pilus twitching motility protein PilT low > 74
Dickeya dianthicola 67-19 0.61 HGI48_RS09940 NUDIX domain-containing protein 0.46 HGI48_RS17340 type IV pilus twitching motility protein PilT low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS10275 NUDIX domain-containing protein 0.46 DZA65_RS18430 type IV pilus twitching motility protein PilT low > 75
Serratia liquefaciens MT49 0.58 IAI46_11585 NUDIX domain-containing protein 0.45 IAI46_21405 type IV pilus twitching motility protein PilT low > 86
Rahnella sp. WP5 0.57 EX31_RS22815 GDP-mannose pyrophosphatase NudK 0.43 EX31_RS02680 type IV pilus twitching motility protein PilT low > 89
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_27560 GDP-mannose pyrophosphatase 0.77 AO353_08155 twitching motility protein PilT low > 101
Variovorax sp. SCN45 0.56 GFF5518 Nudix hydrolase family protein KPN_02621 0.63 GFF3743 Twitching motility protein PilT low > 127
Pectobacterium carotovorum WPP14 0.56 HER17_RS17390 GDP-mannose pyrophosphatase NudK 0.46 HER17_RS03815 type IV pilus twitching motility protein PilT low > 75
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1945.1 GDP-mannose pyrophosphatase YffH 0.70 Xcc-8004.1713.1 Twitching motility protein PilT low > 74
Acidovorax sp. GW101-3H11 0.52 Ac3H11_4083 GDP-mannose pyrophosphatase YffH 0.63 Ac3H11_4473 Twitching motility protein PilT low > 79
Pseudomonas sp. RS175 0.52 PFR28_04570 GDP-mannose pyrophosphatase NudK 0.77 PFR28_04241 Twitching mobility protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4229 GDP-mannose pyrophosphatase YffH 0.78 Pf6N2E2_4602 Twitching motility protein PilT low > 103
Escherichia fergusonii Becca 0.50 EFB2_01421 GDP-mannose pyrophosphatase NudK 0.41 EFB2_00952 putative protein YggR low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS14075 GDP-mannose pyrophosphatase NudK 0.40 ECOLIN_RS16410 type IV pilus twitching motility protein PilT low > 55
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_11785 GDP-mannose pyrophosphatase 0.78 AO356_13430 twitching motility protein PilT low > 104
Escherichia coli ECRC99 0.50 KEDOAH_06235 nudK GDP-mannose pyrophosphatase NudK 0.41 KEDOAH_08880 yggR Uncharacterized protein YggR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF2192 GDP-mannose pyrophosphatase YffH 0.40 GFF3053 Twitching motility protein PilT low > 78
Escherichia coli ECRC100 0.50 OKFHMN_21985 nudK GDP-mannose pyrophosphatase NudK 0.41 OKFHMN_19260 yggR Uncharacterized protein YggR low > 80
Escherichia coli ECRC102 0.50 NIAGMN_19755 nudK GDP-mannose pyrophosphatase NudK 0.41 NIAGMN_17025 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC98 0.50 JDDGAC_25930 nudK GDP-mannose pyrophosphatase NudK 0.41 JDDGAC_22890 yggR Uncharacterized protein YggR low > 86
Escherichia coli ECRC101 0.50 MCAODC_12515 nudK GDP-mannose pyrophosphatase NudK 0.41 MCAODC_09780 yggR Uncharacterized protein YggR low > 87
Escherichia coli BL21 0.50 ECD_02358 GDP-mannose pyrophosphatase 0.41 ECD_02780 putative PilT family AAA+ ATPase low > 61
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_4078 GDP-mannose pyrophosphatase YffH 0.77 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Escherichia coli ECRC62 0.50 BNILDI_12475 nudK GDP-mannose pyrophosphatase NudK 0.41 BNILDI_09710 yggR Uncharacterized protein YggR low > 75
Escherichia coli ECOR38 0.50 HEPCGN_21155 nudK GDP-mannose pyrophosphatase NudK 0.41 HEPCGN_18565 yggR Uncharacterized protein YggR low > 87
Escherichia coli ECOR27 0.50 NOLOHH_13665 nudK GDP-mannose pyrophosphatase NudK 0.41 NOLOHH_11130 yggR Uncharacterized protein YggR low > 75
Escherichia coli BW25113 0.50 b2467 yffH predicted NUDIX hydrolase (NCBI) 0.41 b2950 yggR putative protein transport (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_01264 GDP-mannose pyrophosphatase NudK 0.41 OHPLBJKB_00766 putative protein YggR low > 73

Not shown: 10 genomes with orthologs for PFLU_RS17595 only; 33 genomes with orthologs for PFLU_RS28365 only