Conservation of cofitness between PFLU_RS29215 and PFLU_RS22195 in Pseudomonas fluorescens SBW25

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS29215 response regulator transcription factor 1.0 PFLU_RS22195 DEAD/DEAH box helicase 0.93 10
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS29215 response regulator transcription factor 1.00 PFLU_RS22195 DEAD/DEAH box helicase low > 109
Pseudomonas simiae WCS417 0.99 PS417_27535 chemotaxis protein CheY 0.99 PS417_20275 RNA helicase — —
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_08995 chemotaxis protein CheY 0.90 AO353_18305 RNA helicase low > 101
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2184 Autolysis response regulater LytR 0.91 Pf1N1B4_543 ATP-dependent RNA helicase SrmB — —
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_855 Autolysis response regulater LytR 0.92 PfGW456L13_4451 ATP-dependent RNA helicase SrmB low > 87
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4430 Autolysis response regulater LytR 0.90 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_12785 chemotaxis protein CheY 0.90 AO356_04210 RNA helicase — —
Pseudomonas sp. RS175 0.86 PFR28_04366 Sensory transduction protein LytR 0.89 PFR28_00756 ATP-dependent RNA helicase RhlE low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_0063 Two-component response regulator AlgR 0.85 Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_0063 Two-component response regulator AlgR 0.85 Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas stutzeri RCH2 0.80 Psest_3749 Response regulator of the LytR/AlgR family 0.74 Psest_1627 Superfamily II DNA and RNA helicases low > 67
Pseudomonas putida KT2440 0.80 PP_0185 Positive alginate biosynthesis regulatory protein 0.74 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis low > 96
Pseudomonas sp. S08-1 0.77 OH686_13895 Alginate biosynthesis two-component system response regulator AlgR 0.70 OH686_05415 ATP-dependent RNA helicase SrmB 0.57 23
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_0251 two component transcriptional regulator, LytTR family 0.40 B158DRAFT_1312 Superfamily II DNA and RNA helicases low > 40
Shewanella sp. ANA-3 0.19 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) 0.34 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.19 MIT1002_01189 Transcriptional regulatory protein YehT 0.31 MIT1002_00941 ATP-dependent RNA helicase SrmB — —
Erwinia tracheiphila SCR3 0.18 LU632_RS20440 btsR two-component system response regulator BtsR 0.31 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB low > 74
Shewanella oneidensis MR-1 0.18 SO2823 response regulator (NCBI ptt file) 0.34 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.17 IAI46_23615 two-component system response regulator BtsR 0.31 IAI46_19600 ATP-dependent RNA helicase SrmB low > 86
Pectobacterium carotovorum WPP14 0.16 HER17_RS05370 two-component system response regulator BtsR 0.31 HER17_RS05765 ATP-dependent RNA helicase SrmB low > 75
Shewanella amazonensis SB2B 0.15 Sama_1281 putative two-component response-regulatory protein YehT (RefSeq) 0.33 Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) — —
Pantoea sp. MT58 0.15 IAI47_05560 response regulator transcription factor 0.33 IAI47_04835 ATP-dependent RNA helicase SrmB low > 76
Shewanella loihica PV-4 0.14 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) 0.32 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) — —

Not shown: 58 genomes with orthologs for PFLU_RS29215 only; 0 genomes with orthologs for PFLU_RS22195 only