Conservation of cofitness between PFLU_RS01530 and PFLU_RS04090 in Pseudomonas fluorescens SBW25

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS01530 ABC transporter permease 1.0 PFLU_RS04090 ABC transporter ATP-binding protein 0.50 18
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS01530 ABC transporter permease 1.00 PFLU_RS04090 ABC transporter ATP-binding protein low > 109
Pseudomonas simiae WCS417 0.90 PS417_01490 ABC transporter permease 0.99 PS417_04050 peptide ABC transporter ATP-binding protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_3857 Arginine ABC transporter, permease protein ArtQ 0.96 Pf6N2E2_3313 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) low > 103
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_378 Arginine ABC transporter, permease protein ArtQ 0.96 PfGW456L13_5057 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1642 Arginine ABC transporter, permease protein ArtQ 0.97 Pf1N1B4_1126 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_11990 ABC transporter permease 0.97 AO353_05405 peptide ABC transporter ATP-binding protein low > 101
Pseudomonas sp. RS175 0.79 PFR28_04913 Arginine ABC transporter permease protein ArtQ 0.95 PFR28_00125 Dipeptide transport ATP-binding protein DppD low > 88
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_09905 ABC transporter for L-Lysine, permease component 1 (from data) 0.96 AO356_07270 peptide ABC transporter ATP-binding protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_4913 amino acid ABC transporter membrane protein 1, PAAT family 0.90 Psyr_4241 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_4913 amino acid ABC transporter membrane protein 1, PAAT family 0.90 Psyr_4241 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal low > 86
Pseudomonas putida KT2440 0.74 PP_0281 Amino acid ABC transporter, permease protein 0.86 PP_0879 dipeptide ABC transporter - putative ATP binding subunit low > 96
Pseudomonas sp. S08-1 0.70 OH686_14495 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.81 OH686_08715 Dipeptide ABC transporter, ATP-binding protein DppD 0.78 29
Rhodospirillum rubrum S1H 0.43 Rru_A2252 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) 0.61 Rru_A2359 Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) low > 58
Azospirillum brasilense Sp245 0.42 AZOBR_RS00680 ABC transporter permease 0.61 AZOBR_RS21775 peptide ABC transporter ATP-binding protein 0.47 26
Rahnella sp. WP5 0.42 EX31_RS18645 arginine ABC transporter permease ArtQ 0.59 EX31_RS05500 dipeptide ABC transporter ATP-binding protein low > 89
Escherichia coli ECRC62 0.41 BNILDI_20540 artQ arginine ABC transporter permease ArtQ 0.60 BNILDI_03500 dppD dipeptide ABC transporter ATP-binding protein low > 75
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2089 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.61 EX28DRAFT_3801 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain low > 76
Escherichia coli BL21 0.41 ECD_00867 arginine ABC transporter permease 0.60 ECD_03392 dipeptide/heme ABC transporter ATPase low > 61
Escherichia fergusonii Becca 0.41 EFB2_03199 Arginine ABC transporter permease protein ArtQ 0.60 EFB2_00266 Dipeptide transport ATP-binding protein DppD low > 86
Escherichia coli BW25113 0.41 b0862 artQ arginine transporter subunit (NCBI) 0.60 b3541 dppD dipeptide transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.41 ECOLIN_RS04590 arginine ABC transporter permease ArtQ 0.60 ECOLIN_RS20260 dipeptide ABC transporter ATP-binding protein
Escherichia coli ECRC101 0.41 MCAODC_25110 artQ arginine ABC transporter permease ArtQ 0.60 MCAODC_06630 dppD dipeptide ABC transporter ATP-binding protein low > 87
Escherichia coli ECOR38 0.41 HEPCGN_02115 artQ arginine ABC transporter permease ArtQ 0.60 HEPCGN_14980 dppD dipeptide ABC transporter ATP-binding protein low > 87
Escherichia coli ECOR27 0.41 NOLOHH_22285 artQ arginine ABC transporter permease ArtQ 0.60 NOLOHH_08060 dppD dipeptide ABC transporter ATP-binding protein low > 75
Escherichia coli ECRC102 0.41 NIAGMN_03940 artQ arginine ABC transporter permease ArtQ 0.60 NIAGMN_13875 dppD dipeptide ABC transporter ATP-binding protein
Escherichia coli ECRC100 0.41 OKFHMN_05895 artQ arginine ABC transporter permease ArtQ 0.60 OKFHMN_16115 dppD dipeptide ABC transporter ATP-binding protein low > 80
Escherichia coli ECRC99 0.41 KEDOAH_22015 artQ arginine ABC transporter permease ArtQ 0.60 KEDOAH_12035 dppD dipeptide ABC transporter ATP-binding protein
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02806 Arginine ABC transporter permease protein ArtQ 0.60 OHPLBJKB_00165 Dipeptide transport ATP-binding protein DppD low > 73
Escherichia coli ECRC98 0.41 JDDGAC_09530 artQ arginine ABC transporter permease ArtQ 0.60 JDDGAC_19745 dppD dipeptide ABC transporter ATP-binding protein low > 86
Serratia liquefaciens MT49 0.41 IAI46_08410 arginine ABC transporter permease ArtQ 0.60 IAI46_00490 dipeptide ABC transporter ATP-binding protein low > 86
Enterobacter sp. TBS_079 0.41 MPMX20_01505 Arginine ABC transporter permease protein ArtQ 0.61 MPMX20_00193 Dipeptide transport ATP-binding protein DppD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF770 Arginine ABC transporter, permease protein ArtQ 0.60 GFF478 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) low > 78
Klebsiella michiganensis M5al 0.40 BWI76_RS09510 arginine transporter permease subunit ArtQ 0.59 BWI76_RS26870 dipeptide ABC transporter ATP-binding protein
Azospirillum sp. SherDot2 0.39 MPMX19_02468 Octopine transport system permease protein OccQ 0.60 MPMX19_04416 Dipeptide transport ATP-binding protein DppD low > 112
Pectobacterium carotovorum WPP14 0.38 HER17_RS12460 arginine ABC transporter permease ArtQ 0.59 HER17_RS00235 dipeptide ABC transporter ATP-binding protein low > 75
Erwinia tracheiphila SCR3 0.37 LU632_RS09675 artQ arginine ABC transporter permease ArtQ 0.60 LU632_RS00280 dppD dipeptide ABC transporter ATP-binding protein low > 74

Not shown: 1 genomes with orthologs for PFLU_RS01530 only; 35 genomes with orthologs for PFLU_RS04090 only