Conservation of cofitness between PFLU_RS00365 and PFLU_RS02660 in Pseudomonas fluorescens SBW25

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 1.0 PFLU_RS02660 YgiQ family radical SAM protein 0.48 17
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 1.00 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas simiae WCS417 0.99 PS417_00375 membrane protein 0.99 PS417_02590 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_600 Zinc ABC transporter, inner membrane permease protein ZnuB 0.95 PfGW456L13_137 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0278 ABC-3 0.94 Psyr_0587 Radical SAM low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0278 ABC-3 0.94 Psyr_0587 Radical SAM low > 86
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_10900 hypothetical protein 0.95 AO353_13235 YgiQ family radical SAM protein low > 101
Pseudomonas sp. RS175 0.83 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB 0.94 PFR28_05137 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB 0.94 Pf1N1B4_1396 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_11495 hypothetical protein 0.95 AO356_08575 YgiQ family radical SAM protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB 0.95 Pf6N2E2_3600 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 103
Pseudomonas stutzeri RCH2 0.76 Psest_4310 ABC-type Mn2+/Zn2+ transport systems, permease components 0.82 Psest_0701 uncharacterized radical SAM protein YgiQ low > 67
Pseudomonas putida KT2440 0.76 PP_0117 Zn(2+) ABC transporter - permease subunit 0.90 PP_4872 putative enzyme of unknown function low > 96
Pseudomonas sp. S08-1 0.68 OH686_12250 Zinc ABC transporter, permease protein ZnuB 0.88 OH686_15955 UPF0313 [4Fe-4S] protein YgiQ low > 80
Enterobacter sp. TBS_079 0.56 MPMX20_02765 High-affinity zinc uptake system membrane protein ZnuB 0.63 MPMX20_03857 hypothetical protein low > 85
Azospirillum sp. SherDot2 0.55 MPMX19_05517 High-affinity zinc uptake system membrane protein ZnuB 0.59 MPMX19_06038 hypothetical protein low > 112
Escherichia fergusonii Becca 0.55 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB 0.63 EFB2_00795 hypothetical protein low > 86
Escherichia coli ECRC62 0.54 BNILDI_15525 znuB zinc ABC transporter permease subunit ZnuB 0.63 BNILDI_00820 ygiQ YgiQ family radical SAM protein low > 75
Escherichia coli BL21 0.54 ECD_01830 zinc ABC transporter permease 0.63 ECD_02888 Radical SAM superfamily protein low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB 0.63 GFF3129 Probable Fe-S oxidoreductase family 2 low > 78
Escherichia coli ECOR38 0.54 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB 0.63 HEPCGN_17785 ygiQ YgiQ family radical SAM protein low > 87
Escherichia coli ECOR27 0.54 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB 0.63 NOLOHH_10695 ygiQ YgiQ family radical SAM protein low > 75
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components 0.63 EX28DRAFT_3051 uncharacterized radical SAM protein YgiQ low > 76
Escherichia coli Nissle 1917 0.54 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB 0.63 ECOLIN_RS17355 YgiQ family radical SAM protein — —
Klebsiella michiganensis M5al 0.54 BWI76_RS18140 zinc ABC transporter permease 0.63 BWI76_RS24310 YgiQ family radical SAM protein low > 92
Escherichia coli BW25113 0.54 b1859 znuB high-affinity zinc transporter membrane component (NCBI) 0.63 b4469 ygiQ hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 0.54 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB 0.63 KEDOAH_09230 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC101 0.54 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB 0.63 MCAODC_09430 ygiQ YgiQ family radical SAM protein low > 87
Escherichia coli ECRC100 0.54 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB 0.63 OKFHMN_18915 ygiQ YgiQ family radical SAM protein low > 80
Escherichia coli ECRC98 0.54 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB 0.63 JDDGAC_22550 ygiQ YgiQ family radical SAM protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01869 High-affinity zinc uptake system membrane protein ZnuB 0.63 OHPLBJKB_00686 hypothetical protein low > 73
Escherichia coli ECRC102 0.54 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB 0.63 NIAGMN_16680 ygiQ YgiQ family radical SAM protein — —
Rahnella sp. WP5 0.51 EX31_RS10685 zinc ABC transporter permease subunit ZnuB 0.62 EX31_RS04200 YgiQ family radical SAM protein 0.40 13
Serratia liquefaciens MT49 0.51 IAI46_14615 zinc ABC transporter permease subunit ZnuB 0.62 IAI46_21835 YgiQ family radical SAM protein low > 86
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_10410 zinc ABC transporter permease 0.63 CSW01_08605 YgiQ family radical SAM protein low > 62
Acinetobacter radioresistens SK82 0.25 MPMX26_00093 High-affinity zinc uptake system membrane protein ZnuB 0.66 MPMX26_00127 hypothetical protein low > 36

Not shown: 19 genomes with orthologs for PFLU_RS00365 only; 15 genomes with orthologs for PFLU_RS02660 only