Conservation of cofitness between OKFHMN_12000 and OKFHMN_14600 in Escherichia coli ECRC100

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 1.0 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB 0.58 7
Escherichia coli ECRC62 1.00 BNILDI_07255 tamA autotransporter assembly complex protein TamA 1.00 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECRC101 1.00 MCAODC_02515 tamA autotransporter assembly complex protein TamA 1.00 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECOR27 1.00 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 1.00 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECRC98 1.00 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 1.00 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB 0.82 55
Escherichia coli ECRC102 1.00 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 1.00 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC99 1.00 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 1.00 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03813 Translocation and assembly module subunit TamA 1.00 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 73
Escherichia coli BW25113 1.00 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 1.00 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.99 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia fergusonii Becca 1.00 EFB2_04309 Translocation and assembly module subunit TamA 1.00 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli BL21 1.00 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 1.00 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24510 autotransporter assembly complex protein TamA 1.00 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF874 Uncharacterized protein YtfM precursor 0.97 GFF2892 ATP-dependent RNA helicase RhlB 0.73 21
Enterobacter sp. TBS_079 0.89 MPMX20_00503 Translocation and assembly module subunit TamA 0.96 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3406 Outer membrane protein 0.96 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS02775 outer membrane protein assembly factor 0.92 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Serratia liquefaciens MT49 0.73 IAI46_01770 outer membrane protein assembly factor 0.91 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Pectobacterium carotovorum WPP14 0.72 HER17_RS03980 autotransporter assembly complex protein TamA 0.90 HER17_RS01130 ATP-dependent RNA helicase RhlB 0.93 6
Pantoea sp. MT58 0.72 IAI47_02715 outer membrane protein assembly factor 0.90 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Rahnella sp. WP5 0.72 EX31_RS08695 outer membrane protein assembly factor 0.88 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Erwinia tracheiphila SCR3 0.72 LU632_RS02105 autotransporter assembly complex protein TamA 0.90 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74
Dickeya dadantii 3937 0.69 DDA3937_RS17160 outer membrane protein assembly factor 0.90 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS17215 outer membrane protein assembly factor 0.90 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS18295 outer membrane protein assembly factor 0.90 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12905 outer membrane protein assembly factor 0.75 CSW01_01555 ATP-dependent RNA helicase RhlB low > 62
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.38 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Marinobacter adhaerens HP15 0.28 HP15_2341 surface antigen (D15) 0.41 HP15_2099 DEAD/DEAH box helicase domain protein low > 73
Pseudomonas putida KT2440 0.27 PP_2892 conserved exported protein of unknown function 0.38 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Shewanella amazonensis SB2B 0.27 Sama_1616 hypothetical protein (RefSeq) 0.66 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella loihica PV-4 0.25 Shew_2172 surface antigen (D15) (RefSeq) 0.68 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO2114 conserved hypothetical protein (NCBI ptt file) 0.68 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.25 Shewana3_1894 surface antigen (D15) (RefSeq) 0.68 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.24 MIT1002_04048 Autotransporter assembly factor TamA 0.62 MIT1002_00515 ATP-dependent RNA helicase RhlB low > 70

Not shown: 30 genomes with orthologs for OKFHMN_12000 only; 3 genomes with orthologs for OKFHMN_14600 only