Conservation of cofitness between OKFHMN_09385 and OKFHMN_01580 in Escherichia coli ECRC100

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_09385 fimB integrase 1.0 OKFHMN_01580 ydcR Uncharacterized HTH-type transcriptional regulator YdcR 0.64 18
Escherichia coli ECRC98 1.00 JDDGAC_13020 fimB integrase 1.00 JDDGAC_04070 ydcR Uncharacterized HTH-type transcriptional regulator YdcR low > 86
Escherichia coli ECRC102 1.00 NIAGMN_07435 fimB integrase 1.00 NIAGMN_25715 ydcR Uncharacterized HTH-type transcriptional regulator YdcR — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05825 putative site specific integrase 0.84 BWI76_RS13400 GntR family transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2648 Integrase 0.83 EX28DRAFT_1025 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 76
Pectobacterium carotovorum WPP14 0.75 HER17_RS04720 tyrosine-type recombinase/integrase 0.64 HER17_RS07255 PLP-dependent aminotransferase family protein low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS16520 tyrosine-type recombinase/integrase 0.61 DDA3937_RS14180 PLP-dependent aminotransferase family protein low > 74
Rahnella sp. WP5 0.66 EX31_RS20945 tyrosine-type recombinase/integrase 0.54 EX31_RS17445 PLP-dependent aminotransferase family protein low > 89
Serratia liquefaciens MT49 0.65 IAI46_05415 tyrosine-type recombinase/integrase 0.55 IAI46_15405 PLP-dependent aminotransferase family protein low > 86
Pseudomonas stutzeri RCH2 0.59 Psest_4016 Integrase 0.44 Psest_1570 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 67
Dechlorosoma suillum PS 0.40 Dsui_0218 Integrase 0.45 Dsui_0883 transcriptional regulator with HTH domain and aminotransferase domain low > 51
Pseudomonas sp. S08-1 0.40 OH686_21775 Phage integrase 0.43 OH686_21060 DNA-binding transcriptional regulator, MocR family / aminotransferase domain low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU1527 site-specific recombinase, phage integrase family (TIGR) 0.29 DVU0030 transcriptional regulator, GntR family (TIGR) low > 55
Pseudomonas simiae WCS417 0.38 PS417_10250 integrase 0.46 PS417_12775 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.46 PFLU_RS13455 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.46 PFLU_RS13455 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_11495 integrase 0.46 AO353_22920 GntR family transcriptional regulator low > 101
Shewanella sp. ANA-3 0.36 Shewana3_2953 phage integrase family protein (RefSeq) 0.51 Shewana3_0929 GntR family transcriptional regulator (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS18370 integrase 0.44 RR42_RS10785 GntR family transcriptional regulator low > 128
Lysobacter sp. OAE881 0.30 ABIE51_RS08660 site-specific integrase 0.45 ABIE51_RS03870 PLP-dependent aminotransferase family protein low > 62
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3004 Integrase 0.46 Pf1N1B4_4672 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) — —
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS10240 tyrosine-type recombinase/integrase 0.43 QEN71_RS13030 PLP-dependent aminotransferase family protein low > 153
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01203 Prophage integrase IntA 0.99 OHPLBJKB_02276 2-aminoadipate transaminase low > 73
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS32385 integrase 0.44 BPHYT_RS28695 GntR family transcriptional regulator low > 109
Alteromonas macleodii MIT1002 0.16 MIT1002_04073 Putative prophage CPS-53 integrase 0.50 MIT1002_00662 putative HTH-type transcriptional regulator YdcR low > 70

Not shown: 13 genomes with orthologs for OKFHMN_09385 only; 39 genomes with orthologs for OKFHMN_01580 only