Conservation of cofitness between NOLOHH_15540 and NOLOHH_07950 in Escherichia coli ECOR27

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_15540 mdtB multidrug efflux RND transporter permease subunit MdtB 1.0 NOLOHH_07950 cspA Major cold shock protein 0.55 20
Escherichia coli ECRC100 1.00 OKFHMN_24195 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 OKFHMN_16005 cspA Major cold shock protein — —
Escherichia coli ECRC99 1.00 KEDOAH_03955 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 KEDOAH_12145 cspA Major cold shock protein — —
Escherichia coli ECRC101 1.00 MCAODC_20745 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 MCAODC_06520 cspA Major cold shock protein low > 87
Escherichia coli ECRC98 1.00 JDDGAC_28305 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 JDDGAC_19635 cspA Major cold shock protein low > 86
Escherichia coli ECRC102 1.00 NIAGMN_22140 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 NIAGMN_13765 cspA Major cold shock protein — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12200 multidrug efflux RND transporter permease subunit MdtB 1.00 ECOLIN_RS20345 RNA chaperone/antiterminator CspA low > 55
Escherichia coli BW25113 1.00 b2075 mdtB multidrug efflux system, subunit B (NCBI) 1.00 b3556 cspA major cold shock protein (NCBI) — —
Escherichia fergusonii Becca 1.00 EFB2_01780 Multidrug resistance protein MdtB 1.00 EFB2_00251 Cold shock protein CspA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01629 Multidrug resistance protein MdtB 1.00 OHPLBJKB_00150 Cold shock protein CspA low > 73
Escherichia coli ECRC62 1.00 BNILDI_14455 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 BNILDI_03595 cspA Major cold shock protein low > 75
Escherichia coli BL21 1.00 ECD_01980 multidrug efflux system, subunit B 1.00 ECD_03406 RNA chaperone and antiterminator, cold-inducible — —
Escherichia coli ECOR38 1.00 HEPCGN_02885 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 HEPCGN_14895 cspA Major cold shock protein low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF3854 Multidrug transporter MdtB 1.00 GFF454 Cold shock protein CspA low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19255 multidrug transporter subunit MdtB 0.99 BWI76_RS26980 cold-shock protein low > 92
Enterobacter sp. TBS_079 0.90 MPMX20_03061 Multidrug resistance protein MdtB 0.96 MPMX20_00176 Cold shock protein CspA low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_0483 Cation/multidrug efflux pump 0.96 EX28DRAFT_3819 Cold shock proteins — —
Erwinia tracheiphila SCR3 0.80 LU632_RS08690 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.85 LU632_RS19015 cspA RNA chaperone/antiterminator CspA low > 74
Pseudomonas sp. RS175 0.63 PFR28_02194 Multidrug resistance protein MdtB 0.61 PFR28_02727 Cold shock protein CapB low > 88
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_25875 multidrug transporter 0.62 AO356_00920 cold-shock protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_1272 Acriflavin resistance plasma membrane protein 0.62 Pf6N2E2_171 Cold shock protein CspG — —
Pseudomonas putida KT2440 0.62 PP_3584 multidrug efflux transport system - membrane subunit 0.59 PP_2463 nucleic acid cold-shock chaperone — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3266 Acriflavin resistance plasma membrane protein 0.62 PfGW456L13_3902 Cold shock protein CspG — —
Pseudomonas sp. S08-1 0.62 OH686_00925 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) 0.63 OH686_05655 Cold shock protein of CSP family — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_22895 multidrug transporter 0.62 AO353_20865 cold-shock protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS13430 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.62 PFLU_RS20330 cold-shock protein low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS13430 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.62 PFLU_RS20330 cold-shock protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_4665 Acriflavin resistance plasma membrane protein 0.62 Pf1N1B4_6025 Cold shock protein CspG — —
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2483 Acriflavin resistance protein 0.60 Psyr_2160 cold-shock DNA-binding protein family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2483 Acriflavin resistance protein 0.60 Psyr_2160 cold-shock DNA-binding protein family — —
Pseudomonas stutzeri RCH2 0.59 Psest_2139 Cation/multidrug efflux pump 0.59 Psest_3045 Cold shock proteins low > 67
Castellaniella sp019104865 MT123 0.57 ABCV34_RS14620 multidrug efflux RND transporter permease subunit 0.66 ABCV34_RS06780 cold-shock protein low > 48
Rhodopseudomonas palustris CGA009 0.49 TX73_013310 efflux RND transporter permease subunit 0.55 TX73_006020 cold-shock protein low > 86

Not shown: 34 genomes with orthologs for NOLOHH_15540 only; 12 genomes with orthologs for NOLOHH_07950 only