| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC98 | 1.0 | JDDGAC_09800 | ldtB | L,D-transpeptidase | 1.0 | JDDGAC_27165 | apbE | FAD:protein FMN transferase ApbE | 0.93 | 11 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_06165 | ldtB | L,D-transpeptidase | 1.00 | OKFHMN_23205 | apbE | FAD:protein FMN transferase ApbE | low | > 80 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_01875 | ldtB | L,D-transpeptidase | 0.99 | HEPCGN_22470 | apbE | FAD:protein FMN transferase ApbE | low | > 87 |
| Escherichia fergusonii Becca | 1.00 | EFB2_03286 | | putative L,D-transpeptidase YbiS | 0.99 | EFB2_01641 | | FAD:protein FMN transferase | low | > 86 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_20795 | ldtB | L,D-transpeptidase | 0.99 | BNILDI_13700 | apbE | FAD:protein FMN transferase ApbE | low | > 75 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS04365 | | L,D-transpeptidase | 0.99 | ECOLIN_RS12930 | | FAD:protein FMN transferase ApbE | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_25380 | ldtB | L,D-transpeptidase | 1.00 | MCAODC_14255 | apbE | FAD:protein FMN transferase ApbE | low | > 87 |
| Escherichia coli BW25113 | 1.00 | b0819 | ybiS | hypothetical protein (NCBI) | 1.00 | b2214 | yojL | predicted thiamine biosynthesis lipoprotein (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_22515 | ldtB | L,D-transpeptidase | 0.99 | NOLOHH_14780 | apbE | FAD:protein FMN transferase ApbE | low | > 75 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_04210 | ldtB | L,D-transpeptidase | 1.00 | NIAGMN_20970 | apbE | FAD:protein FMN transferase ApbE | — | — |
| Escherichia coli BL21 | 1.00 | ECD_00786 | | L,D-transpeptidase linking Lpp to murein | 1.00 | ECD_02141 | | putative thiamine-synthetic flavin transferase lipoprotein | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02894 | | putative L,D-transpeptidase YbiS | 0.99 | OHPLBJKB_01496 | | FAD:protein FMN transferase | low | > 73 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_21745 | ldtB | L,D-transpeptidase | 1.00 | KEDOAH_04980 | apbE | FAD:protein FMN transferase ApbE | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF716 | | L,D-transpeptidase YbiS | 0.82 | GFF1828 | | Thiamin biosynthesis lipoprotein ApbE | low | > 78 |
| Klebsiella michiganensis M5al | 0.93 | BWI76_RS09030 | | transpeptidase | 0.78 | BWI76_RS19900 | | FAD:protein FMN transferase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_01456 | | putative L,D-transpeptidase YbiS | 0.79 | MPMX20_03174 | | FAD:protein FMN transferase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2148 | | Uncharacterized protein conserved in bacteria | 0.78 | EX28DRAFT_0362 | | Membrane-associated lipoprotein involved in thiamine biosynthesis | low | > 76 |
| Serratia liquefaciens MT49 | 0.73 | IAI46_02600 | | L,D-transpeptidase family protein | 0.55 | IAI46_17960 | | FAD:protein FMN transferase ApbE | low | > 86 |
| Rahnella sp. WP5 | 0.73 | EX31_RS10780 | | L,D-transpeptidase family protein | 0.63 | EX31_RS07175 | | FAD:protein FMN transferase ApbE | low | > 89 |
| Pantoea sp. MT58 | 0.72 | IAI47_13415 | | L,D-transpeptidase family protein | 0.65 | IAI47_06525 | | FAD:protein FMN transferase ApbE | — | — |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS03570 | | L,D-transpeptidase family protein | 0.57 | DDA3937_RS02890 | | FAD:protein FMN transferase ApbE | low | > 74 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS03790 | | L,D-transpeptidase family protein | 0.56 | DZA65_RS03040 | | FAD:protein FMN transferase ApbE | low | > 75 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS03670 | | L,D-transpeptidase family protein | 0.56 | HGI48_RS02865 | | FAD:protein FMN transferase ApbE | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS17580 | | L,D-transpeptidase family protein | 0.56 | HER17_RS08890 | | FAD:protein FMN transferase ApbE | low | > 75 |
| Shewanella amazonensis SB2B | 0.62 | Sama_0726 | | ErfK/YbiS/YcfS/YnhG (RefSeq) | 0.35 | Sama_2533 | | thiamin biosynthesis lipoprotein ApbE (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.60 | Shewana3_0844 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.36 | Shewana3_0944 | | ApbE family lipoprotein (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.59 | SO3748 | | LysM domain protein (NCBI ptt file) | 0.36 | SO1109 | apbE | thiamin biosynthesis lipoprotein ApbE (NCBI ptt file) | — | — |
| Pseudomonas sp. S08-1 | 0.33 | OH686_01780 | | L,D-transpeptidase | 0.28 | OH686_22000 | | FAD:protein FMN transferase or FAD:protein FMN transferase , NqrBC-associated | 0.64 | 25 |
| Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_2221 | | ErfK/YbiS/YcfS/YnhG family protein | 0.28 | PfGW456L13_4025 | | Thiamin biosynthesis lipoprotein ApbE | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.33 | Pf6N2E2_2474 | | ErfK/YbiS/YcfS/YnhG family protein | 0.28 | Pf6N2E2_2275 | | Thiamin biosynthesis lipoprotein ApbE | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.33 | AO356_03215 | | hypothetical protein | 0.28 | AO356_02255 | | thiamine biosynthesis protein ApbE | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_292 | | ErfK/YbiS/YcfS/YnhG family protein | 0.29 | Pf1N1B4_3918 | | Thiamin biosynthesis lipoprotein ApbE | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.32 | Psest_2334 | | Uncharacterized protein conserved in bacteria | 0.33 | Psest_1661 | | Membrane-associated lipoprotein involved in thiamine biosynthesis | low | > 67 |
Not shown: 0 genomes with orthologs for JDDGAC_09800 only; 37 genomes with orthologs for JDDGAC_27165 only