Conservation of cofitness between JDDGAC_09800 and JDDGAC_26495 in Escherichia coli ECRC98

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_09800 ldtB L,D-transpeptidase 1.0 JDDGAC_26495 mlaA phospholipid-binding lipoprotein MlaA 0.94 7
Escherichia coli ECRC62 1.00 BNILDI_20795 ldtB L,D-transpeptidase 1.00 BNILDI_13080 mlaA phospholipid-binding lipoprotein MlaA low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04365 L,D-transpeptidase 1.00 ECOLIN_RS13570 phospholipid-binding lipoprotein MlaA
Escherichia coli ECRC99 1.00 KEDOAH_21745 ldtB L,D-transpeptidase 1.00 KEDOAH_05660 mlaA phospholipid-binding lipoprotein MlaA
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02894 putative L,D-transpeptidase YbiS 1.00 OHPLBJKB_01360 putative phospholipid-binding lipoprotein MlaA low > 73
Escherichia coli ECOR27 1.00 NOLOHH_22515 ldtB L,D-transpeptidase 1.00 NOLOHH_14170 mlaA phospholipid-binding lipoprotein MlaA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_01875 ldtB L,D-transpeptidase 1.00 HEPCGN_21730 mlaA phospholipid-binding lipoprotein MlaA 0.76 9
Escherichia coli ECRC101 1.00 MCAODC_25380 ldtB L,D-transpeptidase 1.00 MCAODC_13565 mlaA phospholipid-binding lipoprotein MlaA 0.74 22
Escherichia fergusonii Becca 1.00 EFB2_03286 putative L,D-transpeptidase YbiS 1.00 EFB2_01514 Intermembrane phospholipid transport system lipoprotein MlaA 0.62 76
Escherichia coli BW25113 1.00 b0819 ybiS hypothetical protein (NCBI) 1.00 b2346 vacJ predicted lipoprotein (NCBI) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_06165 ldtB L,D-transpeptidase 1.00 OKFHMN_22535 mlaA phospholipid-binding lipoprotein MlaA low > 80
Escherichia coli BL21 1.00 ECD_00786 L,D-transpeptidase linking Lpp to murein 1.00 ECD_02272 ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component low > 61
Escherichia coli ECRC102 1.00 NIAGMN_04210 ldtB L,D-transpeptidase 1.00 NIAGMN_20310 mlaA phospholipid-binding lipoprotein MlaA
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF716 L,D-transpeptidase YbiS 0.97 GFF1958 Lipoprotein low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS09030 transpeptidase 0.89 BWI76_RS20475 phospholipid-binding lipoprotein MlaA low > 92
Enterobacter sp. TBS_079 0.91 MPMX20_01456 putative L,D-transpeptidase YbiS 0.92 MPMX20_03272 Intermembrane phospholipid transport system lipoprotein MlaA low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria 0.92 EX28DRAFT_0267 Surface lipoprotein low > 76
Serratia liquefaciens MT49 0.73 IAI46_02600 L,D-transpeptidase family protein 0.79 IAI46_18065 phospholipid-binding lipoprotein MlaA low > 86
Rahnella sp. WP5 0.73 EX31_RS10780 L,D-transpeptidase family protein 0.76 EX31_RS19725 phospholipid-binding lipoprotein MlaA low > 89
Pantoea sp. MT58 0.72 IAI47_13415 L,D-transpeptidase family protein 0.78 IAI47_06110 phospholipid-binding lipoprotein MlaA low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS03570 L,D-transpeptidase family protein 0.72 DDA3937_RS14625 phospholipid-binding lipoprotein MlaA low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS03790 L,D-transpeptidase family protein 0.71 DZA65_RS15515 phospholipid-binding lipoprotein MlaA low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS03670 L,D-transpeptidase family protein 0.68 HGI48_RS14575 phospholipid-binding lipoprotein MlaA low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS17580 L,D-transpeptidase family protein 0.74 HER17_RS06855 phospholipid-binding lipoprotein MlaA low > 75
Shewanella amazonensis SB2B 0.62 Sama_0726 ErfK/YbiS/YcfS/YnhG (RefSeq) 0.32 Sama_2268 vacJ lipoprotein, putative (RefSeq) 0.24 41
Shewanella sp. ANA-3 0.60 Shewana3_0844 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) 0.31 Shewana3_1371 VacJ family lipoprotein (RefSeq) 0.47 23
Shewanella oneidensis MR-1 0.59 SO3748 LysM domain protein (NCBI ptt file) 0.31 SO3197 vacJ lipoprotein, putative (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2221 ErfK/YbiS/YcfS/YnhG family protein 0.23 PfGW456L13_4012 VacJ-like lipoprotein precursor low > 87
Pseudomonas sp. S08-1 0.33 OH686_01780 L,D-transpeptidase 0.23 OH686_22720 Outer-membrane-phospholipid-binding lipoprotein MlaA low > 80
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_2474 ErfK/YbiS/YcfS/YnhG family protein 0.21 Pf6N2E2_2261 VacJ-like lipoprotein precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_03215 hypothetical protein 0.21 AO356_02190 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_292 ErfK/YbiS/YcfS/YnhG family protein 0.21 Pf1N1B4_62 VacJ-like lipoprotein precursor
Pseudomonas stutzeri RCH2 0.32 Psest_2334 Uncharacterized protein conserved in bacteria 0.22 Psest_2712 Surface lipoprotein 0.21 53

Not shown: 0 genomes with orthologs for JDDGAC_09800 only; 34 genomes with orthologs for JDDGAC_26495 only