Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC98 | 1.0 | JDDGAC_09800 | ldtB | L,D-transpeptidase | 1.0 | JDDGAC_22340 | bacA | undecaprenyl-diphosphate phosphatase | 0.92 | 18 |
Escherichia coli ECRC101 | 1.00 | MCAODC_25380 | ldtB | L,D-transpeptidase | 1.00 | MCAODC_09220 | bacA | undecaprenyl-diphosphate phosphatase | 0.77 | 7 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_04210 | ldtB | L,D-transpeptidase | 1.00 | NIAGMN_16470 | bacA | undecaprenyl-diphosphate phosphatase | — | — |
Escherichia coli ECRC62 | 1.00 | BNILDI_20795 | ldtB | L,D-transpeptidase | 1.00 | BNILDI_01020 | bacA | undecaprenyl-diphosphate phosphatase | 0.78 | 45 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS04365 | | L,D-transpeptidase | 1.00 | ECOLIN_RS17655 | | undecaprenyl-diphosphate phosphatase | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_21745 | ldtB | L,D-transpeptidase | 1.00 | KEDOAH_09440 | bacA | undecaprenyl-diphosphate phosphatase | — | — |
Escherichia coli ECRC100 | 1.00 | OKFHMN_06165 | ldtB | L,D-transpeptidase | 1.00 | OKFHMN_18705 | bacA | undecaprenyl-diphosphate phosphatase | 0.69 | 29 |
Escherichia coli BW25113 | 1.00 | b0819 | ybiS | hypothetical protein (NCBI) | 1.00 | b3057 | bacA | undecaprenyl pyrophosphate phosphatase (NCBI) | low | > 76 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_01875 | ldtB | L,D-transpeptidase | 1.00 | HEPCGN_17560 | bacA | undecaprenyl-diphosphate phosphatase | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02894 | | putative L,D-transpeptidase YbiS | 1.00 | OHPLBJKB_00647 | | Undecaprenyl-diphosphatase | low | > 73 |
Escherichia fergusonii Becca | 1.00 | EFB2_03286 | | putative L,D-transpeptidase YbiS | 1.00 | EFB2_00754 | | Undecaprenyl-diphosphatase | low | > 86 |
Escherichia coli BL21 | 1.00 | ECD_00786 | | L,D-transpeptidase linking Lpp to murein | 1.00 | ECD_02927 | | undecaprenyl pyrophosphate phosphatase | low | > 61 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_22515 | ldtB | L,D-transpeptidase | 1.00 | NOLOHH_10495 | bacA | undecaprenyl-diphosphate phosphatase | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF716 | | L,D-transpeptidase YbiS | 0.94 | GFF3171 | | Undecaprenyl-diphosphatase (EC 3.6.1.27) | low | > 78 |
Klebsiella michiganensis M5al | 0.93 | BWI76_RS09030 | | transpeptidase | 0.92 | BWI76_RS24480 | | undecaprenyl-diphosphatase | low | > 92 |
Enterobacter sp. TBS_079 | 0.91 | MPMX20_01456 | | putative L,D-transpeptidase YbiS | 0.94 | MPMX20_03894 | | Undecaprenyl-diphosphatase | low | > 85 |
Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2148 | | Uncharacterized protein conserved in bacteria | 0.94 | EX28DRAFT_3085 | | undecaprenyl-diphosphatase UppP | low | > 76 |
Serratia liquefaciens MT49 | 0.73 | IAI46_02600 | | L,D-transpeptidase family protein | 0.82 | IAI46_22080 | | undecaprenyl-diphosphate phosphatase | low | > 86 |
Rahnella sp. WP5 | 0.73 | EX31_RS10780 | | L,D-transpeptidase family protein | 0.81 | EX31_RS08165 | | undecaprenyl-diphosphate phosphatase | low | > 89 |
Pantoea sp. MT58 | 0.72 | IAI47_13415 | | L,D-transpeptidase family protein | 0.85 | IAI47_03080 | | undecaprenyl-diphosphate phosphatase | low | > 76 |
Dickeya dadantii 3937 | 0.69 | DDA3937_RS03570 | | L,D-transpeptidase family protein | 0.79 | DDA3937_RS17125 | | undecaprenyl-diphosphate phosphatase | low | > 74 |
Dickeya dianthicola ME23 | 0.69 | DZA65_RS03790 | | L,D-transpeptidase family protein | 0.79 | DZA65_RS18260 | | undecaprenyl-diphosphate phosphatase | low | > 75 |
Dickeya dianthicola 67-19 | 0.69 | HGI48_RS03670 | | L,D-transpeptidase family protein | 0.79 | HGI48_RS17175 | | undecaprenyl-diphosphate phosphatase | 0.75 | 37 |
Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS17580 | | L,D-transpeptidase family protein | 0.83 | HER17_RS04015 | | undecaprenyl-diphosphate phosphatase | low | > 75 |
Shewanella amazonensis SB2B | 0.62 | Sama_0726 | | ErfK/YbiS/YcfS/YnhG (RefSeq) | 0.25 | Sama_0831 | | undecaprenyl pyrophosphate phosphatase (RefSeq) | low | > 62 |
Shewanella sp. ANA-3 | 0.60 | Shewana3_0844 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.26 | Shewana3_3079 | | undecaprenyl pyrophosphate phosphatase (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.59 | SO3748 | | LysM domain protein (NCBI ptt file) | 0.36 | SO4274 | | undecaprenol kinase, putative (NCBI ptt file) | low | > 76 |
Pseudomonas sp. S08-1 | 0.33 | OH686_01780 | | L,D-transpeptidase | 0.41 | OH686_00730 | | undecaprenyl-diphosphatase UppP | — | — |
Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_2221 | | ErfK/YbiS/YcfS/YnhG family protein | 0.42 | PfGW456L13_3016 | | Undecaprenyl-diphosphatase (EC 3.6.1.27) | low | > 87 |
Pseudomonas fluorescens FW300-N2E2 | 0.33 | Pf6N2E2_2474 | | ErfK/YbiS/YcfS/YnhG family protein | 0.40 | Pf6N2E2_773 | | Undecaprenyl-diphosphatase (EC 3.6.1.27) | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.33 | AO356_03215 | | hypothetical protein | 0.40 | AO356_27775 | | UDP pyrophosphate phosphatase | low | > 104 |
Pseudomonas stutzeri RCH2 | 0.32 | Psest_2334 | | Uncharacterized protein conserved in bacteria | 0.40 | Psest_2113 | | undecaprenyl-diphosphatase UppP | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_292 | | ErfK/YbiS/YcfS/YnhG family protein | 0.41 | Pf1N1B4_4741 | | Undecaprenyl-diphosphatase (EC 3.6.1.27) | low | > 87 |
Not shown: 0 genomes with orthologs for JDDGAC_09800 only; 68 genomes with orthologs for JDDGAC_22340 only