Conservation of cofitness between JDDGAC_09800 and JDDGAC_21605 in Escherichia coli ECRC98

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_09800 ldtB L,D-transpeptidase 1.0 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.93 12
Escherichia fergusonii Becca 1.00 EFB2_03286 putative L,D-transpeptidase YbiS 1.00 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE 0.83 1
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02894 putative L,D-transpeptidase YbiS 1.00 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE low > 73
Escherichia coli BL21 1.00 ECD_00786 L,D-transpeptidase linking Lpp to murein 1.00 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein low > 61
Escherichia coli BW25113 1.00 b0819 ybiS hypothetical protein (NCBI) 1.00 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_22515 ldtB L,D-transpeptidase 1.00 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04365 L,D-transpeptidase 1.00 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC100 1.00 OKFHMN_06165 ldtB L,D-transpeptidase 1.00 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 80
Escherichia coli ECRC62 1.00 BNILDI_20795 ldtB L,D-transpeptidase 1.00 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Escherichia coli ECRC99 1.00 KEDOAH_21745 ldtB L,D-transpeptidase 1.00 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECOR38 1.00 HEPCGN_01875 ldtB L,D-transpeptidase 1.00 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 21
Escherichia coli ECRC102 1.00 NIAGMN_04210 ldtB L,D-transpeptidase 1.00 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC101 1.00 MCAODC_25380 ldtB L,D-transpeptidase 1.00 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.70 37
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF716 L,D-transpeptidase YbiS 0.98 GFF2938 Uncharacterized ABC transporter, permease component YrbE low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS09030 transpeptidase 0.97 BWI76_RS25225 ABC transporter permease low > 92
Enterobacter sp. TBS_079 0.91 MPMX20_01456 putative L,D-transpeptidase YbiS 0.97 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria 0.96 EX28DRAFT_3248 ABC transport permease subunit low > 76
Serratia liquefaciens MT49 0.73 IAI46_02600 L,D-transpeptidase family protein 0.86 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 86
Rahnella sp. WP5 0.73 EX31_RS10780 L,D-transpeptidase family protein 0.87 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 89
Pantoea sp. MT58 0.72 IAI47_13415 L,D-transpeptidase family protein 0.87 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS03570 L,D-transpeptidase family protein 0.87 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS03790 L,D-transpeptidase family protein 0.86 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS03670 L,D-transpeptidase family protein 0.86 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS17580 L,D-transpeptidase family protein 0.88 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Shewanella amazonensis SB2B 0.62 Sama_0726 ErfK/YbiS/YcfS/YnhG (RefSeq) 0.69 Sama_3080 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.60 Shewana3_0844 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) 0.69 Shewana3_0679 hypothetical protein (RefSeq) 0.45 24
Shewanella oneidensis MR-1 0.59 SO3748 LysM domain protein (NCBI ptt file) 0.70 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2221 ErfK/YbiS/YcfS/YnhG family protein 0.61 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_2474 ErfK/YbiS/YcfS/YnhG family protein 0.62 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas sp. S08-1 0.33 OH686_01780 L,D-transpeptidase 0.64 OH686_08505 Phospholipid ABC transporter permease protein MlaE 0.66 19
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_03215 hypothetical protein 0.62 AO356_07000 ABC transporter permease low > 104
Pseudomonas stutzeri RCH2 0.32 Psest_2334 Uncharacterized protein conserved in bacteria 0.65 Psest_3306 conserved hypothetical integral membrane protein low > 67
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_292 ErfK/YbiS/YcfS/YnhG family protein 0.62 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE

Not shown: 0 genomes with orthologs for JDDGAC_09800 only; 56 genomes with orthologs for JDDGAC_21605 only