Conservation of cofitness between JDDGAC_01500 and JDDGAC_13415 in Escherichia coli ECRC98

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_01500 astE succinylglutamate desuccinylase 1.0 JDDGAC_13415 yafV 2-oxoglutaramate amidase 0.62 14
Escherichia coli ECRC99 1.00 KEDOAH_01185 astE succinylglutamate desuccinylase 1.00 KEDOAH_18365 yafV 2-oxoglutaramate amidase — —
Escherichia coli ECRC101 1.00 MCAODC_18485 astE succinylglutamate desuccinylase 1.00 MCAODC_00310 yafV 2-oxoglutaramate amidase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_26925 astE succinylglutamate desuccinylase 1.00 OKFHMN_09790 yafV 2-oxoglutaramate amidase low > 80
Escherichia coli ECRC102 1.00 NIAGMN_01140 astE succinylglutamate desuccinylase 1.00 NIAGMN_07650 yafV 2-oxoglutaramate amidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.99 OHPLBJKB_03420 Omega-amidase YafV low > 73
Escherichia coli ECOR27 1.00 NOLOHH_17440 astE succinylglutamate desuccinylase 1.00 NOLOHH_02165 yafV 2-oxoglutaramate amidase low > 75
Escherichia coli BL21 1.00 ECD_01713 succinylglutamate desuccinylase 0.98 ECD_00214 putative NAD(P)-binding C-N hydrolase family amidase low > 61
Escherichia coli BW25113 1.00 b1744 astE succinylglutamate desuccinylase (NCBI) 0.99 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_02249 Succinylglutamate desuccinylase 0.98 EFB2_03798 Omega-amidase YafV low > 86
Escherichia coli ECOR38 0.99 HEPCGN_05290 astE succinylglutamate desuccinylase 0.99 HEPCGN_07895 yafV 2-oxoglutaramate amidase low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS09725 succinylglutamate desuccinylase 0.98 ECOLIN_RS01735 2-oxoglutaramate amidase — —
Escherichia coli ECRC62 0.99 BNILDI_16225 astE succinylglutamate desuccinylase 0.99 BNILDI_00360 yafV 2-oxoglutaramate amidase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.85 GFF4099 Aliphatic amidase AmiE (EC 3.5.1.4) low > 78
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.85 EX28DRAFT_2669 Predicted amidohydrolase — —
Klebsiella michiganensis M5al 0.60 BWI76_RS11690 succinylglutamate desuccinylase 0.86 BWI76_RS05465 amidohydrolase low > 92
Enterobacter sp. TBS_079 0.59 MPMX20_01869 Succinylglutamate desuccinylase 0.86 MPMX20_00909 Omega-amidase YafV low > 85
Pantoea sp. MT58 0.57 IAI47_11075 succinylglutamate desuccinylase 0.74 IAI47_15230 amidohydrolase low > 76
Serratia liquefaciens MT49 0.46 IAI46_15315 succinylglutamate desuccinylase 0.69 IAI46_04295 amidohydrolase low > 86
Rahnella sp. WP5 0.45 EX31_RS17390 succinylglutamate desuccinylase 0.69 EX31_RS21070 amidohydrolase low > 89
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_02995 succinylglutamate desuccinylase 0.48 AO353_15920 carbon-nitrogen hydrolase 0.29 55
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_18755 succinylglutamate desuccinylase 0.47 AO356_06560 carbon-nitrogen hydrolase low > 104
Pseudomonas simiae WCS417 0.32 PS417_21680 succinylglutamate desuccinylase 0.47 PS417_23115 carbon-nitrogen hydrolase low > 88
Pseudomonas putida KT2440 0.32 PP_4475 succinylglutamate desuccinylase 0.47 PP_0859 putative ketoglutaramate omega-amidase low > 96
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.46 PfGW456L13_4855 Aliphatic amidase AmiE (EC 3.5.1.4) low > 87
Pseudomonas sp. RS175 0.32 PFR28_03277 Succinylglutamate desuccinylase 0.46 PFR28_00303 Omega-amidase YafV low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3559 succinylglutamate desuccinylase 0.47 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3559 succinylglutamate desuccinylase 0.47 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.46 Pf6N2E2_3172 Aliphatic amidase AmiE (EC 3.5.1.4) low > 103
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.45 Pf1N1B4_848 Aliphatic amidase AmiE (EC 3.5.1.4) low > 87
Pseudomonas fluorescens SBW25 0.30 PFLU_RS23285 succinylglutamate desuccinylase 0.46 PFLU_RS24770 amidohydrolase low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS23285 succinylglutamate desuccinylase 0.46 PFLU_RS24770 amidohydrolase low > 109
Pseudomonas sp. S08-1 0.30 OH686_21320 succinylglutamate desuccinylase 0.47 OH686_17560 Aliphatic amidase AmiE — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.17 B158DRAFT_2071 Predicted amidohydrolase — —
Pseudomonas stutzeri RCH2 0.22 Psest_2717 Succinylglutamate desuccinylase 0.44 Psest_1269 Predicted amidohydrolase low > 67

Not shown: 11 genomes with orthologs for JDDGAC_01500 only; 20 genomes with orthologs for JDDGAC_13415 only