Conservation of cofitness between IAI46_08995 and IAI46_24385 in Serratia liquefaciens MT49

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_08995 NAD(P)H:quinone oxidoreductase 1.0 IAI46_24385 HTH-type transcriptional regulator HdfR 0.40 18
Klebsiella michiganensis M5al 0.84 BWI76_RS10740 NAD(P)H:quinone oxidoreductase 0.63 BWI76_RS00940 transcriptional regulator HdfR low > 92
Enterobacter sp. TBS_079 0.84 MPMX20_01689 NAD(P)H dehydrogenase (quinone) 0.63 MPMX20_04505 HTH-type transcriptional regulator HdfR low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1923 NAD(P)H:quinone oxidoreductase, type IV 0.62 EX28DRAFT_4436 Transcriptional regulator low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF3296 Flavoprotein WrbA 0.63 GFF2907 HTH-type transcriptional regulator hdfR 0.32 39
Rahnella sp. WP5 0.82 EX31_RS10720 NAD(P)H:quinone oxidoreductase 0.81 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Escherichia coli BW25113 0.82 b1004 wrbA TrpR binding protein WrbA (NCBI) 0.63 b4480 hdfR transcriptional regulator HdfR (NCBI) low > 76
Escherichia coli Nissle 1917 0.82 ECOLIN_RS05235 NAD(P)H:quinone oxidoreductase 0.63 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR — —
Escherichia coli ECOR38 0.82 HEPCGN_23485 wrbA NAD(P)H:quinone oxidoreductase 0.63 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_02663 NAD(P)H dehydrogenase (quinone) 0.63 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR low > 73
Escherichia coli ECRC62 0.82 BNILDI_19720 wrbA NAD(P)H:quinone oxidoreductase 0.63 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia fergusonii Becca 0.82 EFB2_03076 NAD(P)H dehydrogenase (quinone) 0.63 EFB2_04871 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli ECOR27 0.82 NOLOHH_21555 wrbA NAD(P)H:quinone oxidoreductase 0.63 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli BL21 0.82 ECD_01007 NAD(P)H:quinone oxidoreductase 0.63 ECD_03642 flhDC operon transcriptional repressor low > 61
Escherichia coli ECRC101 0.81 MCAODC_24040 wrbA NAD(P)H:quinone oxidoreductase 0.63 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR low > 87
Pseudomonas stutzeri RCH2 0.81 Psest_1580 NAD(P)H:quinone oxidoreductase, type IV 0.21 Psest_0802 Transcriptional regulator low > 67
Escherichia coli ECRC99 0.81 KEDOAH_23090 wrbA NAD(P)H:quinone oxidoreductase 0.63 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECRC100 0.81 OKFHMN_04655 wrbA NAD(P)H:quinone oxidoreductase 0.63 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR low > 80
Escherichia coli ECRC98 0.81 JDDGAC_08265 wrbA NAD(P)H:quinone oxidoreductase 0.63 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS10140 wrbA NAD(P)H:quinone oxidoreductase 0.73 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR low > 74
Pantoea sp. MT58 0.79 IAI47_12550 NAD(P)H:quinone oxidoreductase 0.74 IAI47_01000 HTH-type transcriptional regulator HdfR low > 76
Escherichia coli ECRC102 0.74 NIAGMN_23195 wrbA NAD(P)H:quinone oxidoreductase 0.63 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_25195 NAD(P)H:quinone oxidoreductase 0.19 AO353_22745 LysR family transcriptional regulator low > 101
Azospirillum sp. SherDot2 0.57 MPMX19_05003 NAD(P)H dehydrogenase (quinone) 0.20 MPMX19_03737 HTH-type transcriptional regulator HdfR low > 112
Sinorhizobium meliloti 1021 0.57 SMc00943 TrpR binding protein WrbA 0.20 SMc02596 transcriptional regulator low > 103
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_2023 Flavoprotein WrbA 0.21 PfGW456L13_2837 HTH-type transcriptional regulator hdfR low > 87
Pseudomonas fluorescens SBW25 0.31 PFLU_RS18440 NAD(P)H:quinone oxidoreductase 0.20 PFLU_RS19485 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS18440 NAD(P)H:quinone oxidoreductase 0.20 PFLU_RS19485 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.31 PS417_16400 NAD(P)H-quinone oxidoreductase 0.20 PS417_17700 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5714 Flavoprotein WrbA 0.18 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR low > 103
Pseudomonas putida KT2440 0.31 PP_1644 NAD(P)H dehydrogenase (quinone) 0.19 PP_2350 LysR family transcriptional regulator low > 96
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_19015 NAD(P)H-quinone oxidoreductase 0.18 AO356_00585 LysR family transcriptional regulator low > 104
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_10795 NAD(P)H:quinone oxidoreductase 0.32 CSW01_19195 LysR family transcriptional regulator low > 62
Alteromonas macleodii MIT1002 0.29 MIT1002_02214 NAD(P)H dehydrogenase (quinone) 0.23 MIT1002_02368 HTH-type transcriptional activator AllS 0.48 60
Variovorax sp. OAS795 0.29 ABID97_RS18920 NAD(P)H:quinone oxidoreductase 0.22 ABID97_RS24430 LysR family transcriptional regulator low > 91
Pseudomonas sp. RS175 0.28 PFR28_03233 NAD(P)H dehydrogenase (quinone) 0.18 PFR28_01360 HTH-type transcriptional regulator HdfR low > 88

Not shown: 34 genomes with orthologs for IAI46_08995 only; 10 genomes with orthologs for IAI46_24385 only