Conservation of cofitness between IAI46_21835 and IAI46_14350 in Serratia liquefaciens MT49

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_21835 YgiQ family radical SAM protein 1.0 IAI46_14350 peptide-methionine (R)-S-oxide reductase MsrB 0.49 7
Klebsiella michiganensis M5al 0.86 BWI76_RS24310 YgiQ family radical SAM protein 0.74 BWI76_RS11515 peptide-methionine (R)-S-oxide reductase low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_03857 hypothetical protein 0.73 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB low > 85
Escherichia coli Nissle 1917 0.85 ECOLIN_RS17355 YgiQ family radical SAM protein 0.72 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB — —
Escherichia coli ECRC62 0.85 BNILDI_00820 ygiQ YgiQ family radical SAM protein 0.72 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECOR27 0.85 NOLOHH_10695 ygiQ YgiQ family radical SAM protein 0.72 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB low > 57
Escherichia coli BW25113 0.85 b4469 ygiQ hypothetical protein (NCBI) 0.72 b1778 yeaA methionine sulfoxide reductase B (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00686 hypothetical protein 0.73 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB low > 73
Escherichia fergusonii Becca 0.85 EFB2_00795 hypothetical protein 0.72 EFB2_02216 Peptide methionine sulfoxide reductase MsrB low > 86
Escherichia coli ECRC101 0.85 OKFHMN_18915 ygiQ YgiQ family radical SAM protein 0.72 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECRC99 0.85 KEDOAH_09230 ygiQ YgiQ family radical SAM protein 0.72 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECRC102 0.85 NIAGMN_16680 ygiQ YgiQ family radical SAM protein 0.72 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECRC101 0.85 MCAODC_09430 ygiQ YgiQ family radical SAM protein 0.72 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECOR38 0.85 HEPCGN_17785 ygiQ YgiQ family radical SAM protein 0.72 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB low > 85
Escherichia coli ECRC98 0.85 JDDGAC_22550 ygiQ YgiQ family radical SAM protein 0.72 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli BL21 0.85 ECD_02888 Radical SAM superfamily protein 0.72 ECD_01747 methionine sulfoxide reductase B low > 60
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3051 uncharacterized radical SAM protein YgiQ 0.73 EX28DRAFT_1772 methionine-R-sulfoxide reductase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF3129 Probable Fe-S oxidoreductase family 2 0.73 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.39 60
Rahnella sp. WP5 0.84 EX31_RS04200 YgiQ family radical SAM protein 0.74 EX31_RS06285 peptide-methionine (R)-S-oxide reductase MsrB low > 89
Alteromonas macleodii MIT1002 0.72 MIT1002_01793 ribosomal protein S12 methylthiotransferase 0.53 MIT1002_02396 Peptide methionine sulfoxide reductase MsrB low > 70
Pseudomonas sp. S08-1 0.66 OH686_15955 UPF0313 [4Fe-4S] protein YgiQ 0.49 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB low > 80
Pseudomonas putida KT2440 0.66 PP_4872 putative enzyme of unknown function 0.49 PP_1873 Peptide methionine sulfoxide reductase MsrB low > 96
Pseudomonas stutzeri RCH2 0.65 Psest_0701 uncharacterized radical SAM protein YgiQ 0.53 Psest_1773 methionine-R-sulfoxide reductase low > 67
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_137 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.50 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 87
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS02660 YgiQ family radical SAM protein 0.51 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS02660 YgiQ family radical SAM protein 0.51 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB low > 109
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_0587 Radical SAM 0.48 Psyr_3614 Protein of unknown function DUF25 low > 86
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_13235 YgiQ family radical SAM protein 0.50 AO353_19155 peptide methionine sulfoxide reductase low > 101
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_08575 YgiQ family radical SAM protein 0.49 AO356_03085 peptide methionine sulfoxide reductase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_0587 Radical SAM 0.48 Psyr_3614 Protein of unknown function DUF25 low > 86
Pseudomonas simiae WCS417 0.65 PS417_02590 hypothetical protein 0.50 PS417_08565 peptide methionine sulfoxide reductase low > 88
Pseudomonas sp. RS175 0.64 PFR28_05137 hypothetical protein 0.50 PFR28_00985 Peptide methionine sulfoxide reductase MsrB low > 88
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_3600 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.49 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 103
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1396 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.50 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 87
Acinetobacter radioresistens SK82 0.62 MPMX26_00127 hypothetical protein 0.48 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB low > 36
Azospirillum sp. SherDot2 0.59 MPMX19_06038 hypothetical protein 0.37 MPMX19_06019 Peptide methionine sulfoxide reductase MsrB low > 112
Rhodopseudomonas palustris CGA009 0.58 TX73_003515 YgiQ family radical SAM protein 0.44 TX73_021075 peptide-methionine (R)-S-oxide reductase MsrB low > 86

Not shown: 18 genomes with orthologs for IAI46_21835 only; 36 genomes with orthologs for IAI46_14350 only