Conservation of cofitness between IAI46_20925 and IAI46_00780 in Serratia liquefaciens MT49

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_20925 IclR family transcriptional regulator 1.0 IAI46_00780 homoserine/homoserine lactone efflux protein 0.44 20
Erwinia tracheiphila SCR3 0.83 LU632_RS04225 IclR family transcriptional regulator 0.83 LU632_RS24085 rhtB homoserine/homoserine lactone efflux protein low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_00130 DNA-binding transcriptional repressor YiaJ 0.79 OHPLBJKB_04227 Homoserine/homoserine lactone efflux protein low > 73
Escherichia coli Nissle 1917 0.77 ECOLIN_RS20440 IclR family transcriptional regulator YiaJ 0.79 ECOLIN_RS21945 homoserine/homoserine lactone efflux protein low > 52
Escherichia coli ECOR38 0.77 HEPCGN_14790 yiaJ IclR family transcriptional regulator YiaJ 0.79 HEPCGN_13050 rhtB homoserine/homoserine lactone efflux protein low > 85
Escherichia coli BL21 0.77 ECD_03426 transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon 0.79 ECD_03703 homoserine, homoserine lactone and S-methyl-methionine efflux pump low > 60
Escherichia coli BW25113 0.77 b3574 yiaJ predicted DNA-binding transcriptional repressor (NCBI) 0.79 b3824 rhtB neutral amino-acid efflux system (NCBI) low > 76
Escherichia fergusonii Becca 0.77 EFB2_00233 DNA-binding transcriptional repressor YiaJ 0.79 EFB2_04813 Homoserine/homoserine lactone efflux protein low > 86
Escherichia coli ECOR27 0.77 NOLOHH_07845 yiaJ IclR family transcriptional regulator YiaJ 0.79 NOLOHH_06480 rhtB homoserine/homoserine lactone efflux protein low > 57
Escherichia coli ECRC62 0.77 BNILDI_03700 yiaJ IclR family transcriptional regulator YiaJ 0.80 BNILDI_05050 rhtB homoserine/homoserine lactone efflux protein
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF436 Transcriptional regulator, IclR family 0.75 GFF250 Homoserine/homoserine lactone efflux protein low > 78
Enterobacter sp. TBS_079 0.76 MPMX20_00156 DNA-binding transcriptional repressor YiaJ 0.80 MPMX20_04456 Homoserine/homoserine lactone efflux protein low > 85
Klebsiella michiganensis M5al 0.75 BWI76_RS27075 IclR family transcriptional regulator 0.81 BWI76_RS01255 homoserine/homoserine lactone efflux protein low > 92
Dickeya dadantii 3937 0.73 DDA3937_RS18500 IclR family transcriptional regulator 0.80 DDA3937_RS19835 homoserine/homoserine lactone efflux protein low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS19560 helix-turn-helix domain-containing protein 0.86 DZA65_RS21035 homoserine/homoserine lactone efflux protein low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS18425 IclR family transcriptional regulator 0.79 HGI48_RS19990 homoserine/homoserine lactone efflux protein low > 71
Acidovorax sp. GW101-3H11 0.22 Ac3H11_532 Predicted Lactate-responsive regulator, IclR family 0.29 Ac3H11_3616 Putative threonine efflux protein low > 79
Variovorax sp. SCN45 0.22 GFF1167 Predicted Lactate-responsive regulator, IclR family 0.40 GFF2024 L-lysine permease low > 127
Ralstonia solanacearum PSI07 0.22 RPSI07_RS15870 IclR family transcriptional regulator 0.39 RPSI07_RS22500 lysine transporter LysE low > 81
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS13415 IclR family transcriptional regulator 0.38 ABZR87_RS06660 LysE family transporter low > 80
Variovorax sp. OAS795 0.22 ABID97_RS14920 IclR family transcriptional regulator 0.31 ABID97_RS13975 LysE family transporter low > 91
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS07425 IclR family transcriptional regulator 0.39 RR42_RS01735 lysine transporter LysE low > 128
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS05750 IclR family transcriptional regulator 0.29 QEN71_RS34930 LysE family transporter low > 153
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS08180 IclR family transcriptional regulator 0.34 HSERO_RS09360 lysine transporter LysE
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF4283 Predicted Lactate-responsive regulator, IclR family 0.38 GFF1708 Homoserine/homoserine lactone efflux protein low > 90
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_2131 D-galactonate regulator, IclR family 0.40 PfGW456L13_867 Homoserine/homoserine lactone efflux protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_01260 transcriptional regulator 0.44 AO353_08940 threonine transporter RhtB low > 101
Pseudomonas sp. RS175 0.19 PFR28_02983 HTH-type transcriptional regulator XynR 0.43 PFR28_04355 Homoserine/homoserine lactone efflux protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_396 D-galactonate regulator, IclR family 0.40 Pf1N1B4_2196 Homoserine/homoserine lactone efflux protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_5979 D-galactonate regulator, IclR family 0.43 Pf6N2E2_4441 Homoserine/homoserine lactone efflux protein low > 103
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_1991 transcriptional regulator, IclR family 0.40 Psyr_0050 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_1991 transcriptional regulator, IclR family 0.40 Psyr_0050 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas fluorescens SBW25 0.17 PFLU_RS22940 IclR family transcriptional regulator 0.45 PFLU_RS29150 threonine transporter RhtB low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS22940 IclR family transcriptional regulator 0.45 PFLU_RS29150 threonine transporter RhtB low > 109
Pseudomonas simiae WCS417 0.17 PS417_21320 transcriptional regulator 0.45 PS417_27470 threonine transporter RhtB low > 88

Not shown: 5 genomes with orthologs for IAI46_20925 only; 32 genomes with orthologs for IAI46_00780 only