Conservation of cofitness between HSERO_RS07340 and HSERO_RS20655 in Herbaspirillum seropedicae SmR1

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07340 LysR family transcriptional regulator 1.0 HSERO_RS20655 phenylacetate-CoA ligase 0.25 11
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS23045 LysR family transcriptional regulator 0.76 RR42_RS23755 phenylacetate--CoA ligase low > 128
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS27430 LysR family transcriptional regulator 0.69 BPHYT_RS17360 phenylacetate-CoA ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS07335 LysR family transcriptional regulator 0.10 PFLU_RS06820 phenylacetate--CoA ligase family protein low > 109
Pseudomonas fluorescens SBW25 0.39 PFLU_RS07335 LysR family transcriptional regulator 0.10 PFLU_RS06820 phenylacetate--CoA ligase family protein low > 109
Paraburkholderia graminis OAS925 0.37 ABIE53_005445 DNA-binding transcriptional LysR family regulator 0.68 ABIE53_003634 phenylacetate-CoA ligase low > 113
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS08345 LysR family transcriptional regulator 0.66 ABZR87_RS02110 phenylacetate--CoA ligase PaaK low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF2179 LysR family transcriptional regulator YbhD 0.69 GFF622 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) low > 90
Azospirillum sp. SherDot2 0.37 MPMX19_03557 HTH-type transcriptional regulator CynR 0.68 MPMX19_05780 Phenylacetate-coenzyme A ligase low > 112
Escherichia coli ECOR27 0.35 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.67 NOLOHH_19440 paaF phenylacetate--CoA ligase low > 75
Escherichia coli ECRC62 0.35 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.67 BNILDI_17895 paaF phenylacetate--CoA ligase low > 75
Escherichia coli BW25113 0.35 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.67 b1398 paaK phenylacetyl-CoA ligase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.66 OHPLBJKB_02313 Phenylacetate-coenzyme A ligase low > 73
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS11315 LysR family transcriptional regulator 0.69 QEN71_RS27520 phenylacetate--CoA ligase PaaK low > 153
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_03335 transcriptional regulator, LysR family 0.68 H281DRAFT_05720 phenylacetate-CoA ligase low > 103
Klebsiella michiganensis M5al 0.34 BWI76_RS04365 LysR family transcriptional regulator 0.68 BWI76_RS13140 phenylacetate-CoA ligase low > 92
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0581 Transcriptional regulator 0.67 EX28DRAFT_1410 phenylacetate-CoA ligase (EC 6.2.1.30) low > 76
Pantoea sp. MT58 0.33 IAI47_10140 LysR family transcriptional regulator 0.08 IAI47_20825 phenylacetate--CoA ligase family protein low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_02971 HTH-type transcriptional regulator CynR 0.67 MPMX20_02152 Phenylacetate-coenzyme A ligase low > 85
Variovorax sp. SCN45 0.26 GFF6064 Transcriptional regulator YfeR, LysR family 0.72 GFF6091 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) — —
Rhodospirillum rubrum S1H 0.25 Rru_A1466 Transcriptional Regulator, LysR family (NCBI) 0.54 Rru_A1976 Phenylacetate--CoA ligase (NCBI) low > 58
Serratia liquefaciens MT49 0.24 IAI46_18415 LysR family transcriptional regulator 0.65 IAI46_16400 phenylacetate--CoA ligase low > 86
Variovorax sp. OAS795 0.23 ABID97_RS27955 LysR family transcriptional regulator 0.72 ABID97_RS22780 phenylacetate--CoA ligase PaaK low > 91
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS05100 LysR family transcriptional regulator 0.66 RALBFv3_RS06455 phenylacetate--CoA ligase low > 76
Ralstonia solanacearum UW163 0.23 UW163_RS08525 LysR family transcriptional regulator 0.66 UW163_RS07170 phenylacetate--CoA ligase — —

Not shown: 20 genomes with orthologs for HSERO_RS07340 only; 24 genomes with orthologs for HSERO_RS20655 only