Conservation of cofitness between HSERO_RS03350 and HSERO_RS17030 in Herbaspirillum seropedicae SmR1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03350 hypothetical protein 1.0 HSERO_RS17030 xylulokinase 0.31 3
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS02430 pyruvate kinase 0.66 QEN71_RS21335 xylulokinase low > 153
Acidovorax sp. GW101-3H11 0.67 Ac3H11_654 Pyruvate kinase (EC 2.7.1.40) 0.46 Ac3H11_2937 Xylulose kinase (EC 2.7.1.17) low > 79
Dickeya dianthicola 67-19 0.46 HGI48_RS10155 pyruvate kinase 0.44 HGI48_RS00305 xylulokinase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS10570 pyruvate kinase 0.45 DZA65_RS00300 xylulokinase low > 75
Dickeya dadantii 3937 0.46 DDA3937_RS10125 pyruvate kinase 0.46 DDA3937_RS20940 xylulokinase low > 74
Pectobacterium carotovorum WPP14 0.46 HER17_RS11790 pyruvate kinase 0.47 HER17_RS21090 xylulokinase low > 75
Escherichia fergusonii Becca 0.45 EFB2_02088 Pyruvate kinase II 0.45 EFB2_00243 Xylulose kinase low > 86
Escherichia coli Nissle 1917 0.45 ECOLIN_RS10330 pyruvate kinase 0.45 ECOLIN_RS20385 xylulokinase low > 55
Rahnella sp. WP5 0.45 EX31_RS10640 pyruvate kinase 0.45 EX31_RS09770 xylulokinase 0.32 23
Escherichia coli BL21 0.45 ECD_01825 pyruvate kinase II 0.45 ECD_03416 xylulokinase low > 61
Escherichia coli ECOR27 0.45 NOLOHH_16835 pyk pyruvate kinase 0.45 NOLOHH_07905 xylB xylulokinase low > 75
Escherichia coli ECRC62 0.45 BNILDI_15630 pyk pyruvate kinase 0.45 BNILDI_03640 xylB xylulokinase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01874 Pyruvate kinase II 0.45 OHPLBJKB_00140 Xylulose kinase low > 73
Escherichia coli ECRC102 0.45 NIAGMN_01740 pyk pyruvate kinase 0.45 NIAGMN_13720 xylB xylulokinase — —
Escherichia coli ECRC100 0.45 OKFHMN_26320 pyk pyruvate kinase 0.45 OKFHMN_15960 xylB xylulokinase low > 80
Escherichia coli ECRC101 0.45 MCAODC_19085 pyk pyruvate kinase 0.45 MCAODC_06475 xylB xylulokinase low > 87
Escherichia coli ECRC98 0.45 JDDGAC_00895 pyk pyruvate kinase 0.45 JDDGAC_19590 xylB xylulokinase low > 86
Escherichia coli ECRC99 0.45 KEDOAH_01785 pyk pyruvate kinase 0.45 KEDOAH_12190 xylB xylulokinase — —
Pantoea sp. MT58 0.45 IAI47_08485 pyruvate kinase 0.43 IAI47_00200 xylulokinase low > 76
Serratia liquefaciens MT49 0.45 IAI46_14585 pyruvate kinase 0.44 IAI46_00275 xylulokinase low > 86
Enterobacter sp. TBS_079 0.44 MPMX20_02759 Pyruvate kinase II 0.44 MPMX20_00166 Xylulose kinase low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_0702 pyruvate kinase 0.44 EX28DRAFT_3829 D-xylulose kinase low > 76
Lysobacter sp. OAE881 0.40 ABIE51_RS17040 pyruvate kinase 0.22 ABIE51_RS03610 xylulokinase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.1243.1 Pyruvate kinase (EC 2.7.1.40) 0.23 Xcc-8004.3065.1 Xylulose kinase (EC 2.7.1.17) low > 74
Azospirillum sp. SherDot2 0.34 MPMX19_04074 Pyruvate kinase 0.46 MPMX19_03030 Xylulose kinase low > 112
Dinoroseobacter shibae DFL-12 0.32 Dshi_0228 pyruvate kinase (RefSeq) 0.41 Dshi_1997 Xylulose kinase (EC 2.7.1.17) (from data) — —
Mycobacterium tuberculosis H37Rv 0.32 Rv1617 Probable pyruvate kinase PykA 0.09 Rv0729 Possible D-xylulose kinase XylB (xylulokinase) (xylulose kinase) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS01590 pyruvate kinase 0.15 ABZR88_RS16155 xylulokinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2317 pyruvate kinase 0.17 Echvi_1875 xylulokinase (EC 2.7.1.17) (from data) low > 79
Sinorhizobium meliloti 1021 0.31 SMc04005 pyruvate kinase 0.48 SMc03164 Xylulose kinase (EC 2.7.1.17) (from data) low > 103
Agrobacterium fabrum C58 0.30 Atu3762 pyruvate kinase 0.48 Atu4482 xylulokinase — —
Rhizobium sp. OAE497 0.29 ABIE40_RS16145 pyruvate kinase 0.48 ABIE40_RS16815 xylulokinase — —
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS09670 pyruvate kinase 0.14 HMPREF1058_RS06655 carbohydrate kinase — —
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS07010 pyruvate kinase 0.14 ABI39_RS20450 carbohydrate kinase low > 72
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02121 pyruvate kinase 0.15 BACOVA_02533 carbohydrate kinase, FGGY family protein — —
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS01240 pyruvate kinase 0.14 HMPREF1181_RS14650 xylulokinase low > 56

Not shown: 65 genomes with orthologs for HSERO_RS03350 only; 0 genomes with orthologs for HSERO_RS17030 only