Conservation of cofitness between HSERO_RS06810 and HSERO_RS10190 in Herbaspirillum seropedicae SmR1

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06810 hemolysin D 1.0 HSERO_RS10190 flagellar basal body rod modification protein FlgD 0.33 16
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA 0.24 Xcc-8004.2780.1 Flagellar basal-body rod modification protein FlgD low > 74
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit 0.23 ABZR86_RS20085 flagellar hook capping FlgD N-terminal domain-containing protein low > 74
Ralstonia solanacearum UW163 0.58 UW163_RS19385 efflux RND transporter periplasmic adaptor subunit 0.29 UW163_RS17455 flagellar basal body rod modification protein FlgD — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS19790 efflux RND transporter periplasmic adaptor subunit 0.29 RALBFv3_RS21730 flagellar basal body rod modification protein FlgD low > 76
Ralstonia solanacearum PSI07 0.57 RPSI07_RS03395 efflux RND transporter periplasmic adaptor subunit 0.28 RPSI07_RS01400 flagellar basal body rod modification protein FlgD low > 81
Ralstonia solanacearum GMI1000 0.57 RS_RS21035 efflux RND transporter periplasmic adaptor subunit 0.28 RS_RS18805 flagellar basal body rod modification protein FlgD low > 80
Serratia liquefaciens MT49 0.49 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX 0.34 IAI46_15950 flagellar hook assembly protein FlgD low > 86
Pantoea sp. MT58 0.48 IAI47_14510 efflux RND transporter periplasmic adaptor subunit 0.35 IAI47_12155 flagellar hook assembly protein FlgD low > 76
Escherichia fergusonii Becca 0.48 EFB2_00559 Multidrug export protein AcrE 0.35 EFB2_02899 Basal-body rod modification protein FlgD low > 86
Erwinia tracheiphila SCR3 0.47 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit 0.30 LU632_RS10405 flgD flagellar hook assembly protein FlgD — —
Dickeya dadantii 3937 0.47 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit 0.35 DDA3937_RS13470 flagellar hook assembly protein FlgD low > 74
Escherichia coli ECOR38 0.47 HEPCGN_16480 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.35 HEPCGN_23825 flgD flagellar hook assembly protein FlgD low > 87
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18750 multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.34 ECOLIN_RS06225 flagellar hook assembly protein FlgD low > 55
Enterobacter sp. TBS_079 0.47 MPMX20_01065 Multidrug efflux pump subunit AcrA 0.35 MPMX20_01754 Basal-body rod modification protein FlgD low > 85
Rahnella sp. WP5 0.47 EX31_RS22475 efflux RND transporter periplasmic adaptor subunit 0.36 EX31_RS11305 flagellar hook assembly protein FlgD 0.54 13
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00440 Multidrug export protein AcrE 0.35 OHPLBJKB_02590 Basal-body rod modification protein FlgD low > 73
Escherichia coli ECRC102 0.46 NIAGMN_15420 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.35 NIAGMN_24165 flgD flagellar hook assembly protein FlgD — —
Escherichia coli ECRC99 0.46 KEDOAH_10490 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.35 KEDOAH_24090 flgD flagellar hook assembly protein FlgD — —
Escherichia coli ECRC62 0.46 BNILDI_02075 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.34 BNILDI_19355 flgD flagellar hook assembly protein FlgD low > 75
Escherichia coli ECOR27 0.46 NOLOHH_09445 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.34 NOLOHH_21195 flgD flagellar hook assembly protein FlgD low > 75
Escherichia coli BW25113 0.46 b3265 acrE cytoplasmic membrane lipoprotein (NCBI) 0.34 b1075 flgD flagellar basal body rod modification protein D (NCBI) low > 76
Escherichia coli ECRC100 0.46 OKFHMN_17660 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.35 OKFHMN_03665 flgD flagellar hook assembly protein FlgD low > 80
Escherichia coli ECRC98 0.46 JDDGAC_21285 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.35 JDDGAC_07325 flgD flagellar hook assembly protein FlgD 0.62 77
Escherichia coli ECRC101 0.46 MCAODC_08180 acrE multidrug efflux RND transporter periplasmic adaptor subunit AcrE 0.35 MCAODC_23025 flgD flagellar hook assembly protein FlgD low > 87
Escherichia coli BL21 0.46 ECD_03123 cytoplasmic membrane lipoprotein 0.34 ECD_01071 flagellar hook assembly protein low > 61
Pseudomonas fluorescens SBW25 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.19 PFLU_RS23170 flagellar hook assembly protein FlgD 0.73 4
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit 0.19 PFLU_RS23170 flagellar hook assembly protein FlgD low > 109
Dickeya dianthicola 67-19 0.46 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit 0.35 HGI48_RS13515 flagellar hook assembly protein FlgD low > 71
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2495 RND family efflux transporter, MFP subunit 0.34 EX28DRAFT_1857 Flagellar hook capping protein 0.61 56
Pectobacterium carotovorum WPP14 0.46 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit 0.36 HER17_RS08175 flagellar hook assembly protein FlgD low > 75
Dickeya dianthicola ME23 0.46 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit 0.35 DZA65_RS14000 flagellar hook assembly protein FlgD low > 75
Pseudomonas sp. RS175 0.45 PFR28_00632 putative efflux pump periplasmic linker TtgA 0.28 PFR28_03252 Basal-body rod modification protein FlgD low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2117 RND efflux system, membrane fusion protein CmeA 0.33 GFF3356 Flagellar basal-body rod modification protein FlgD low > 78
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS34600 hemolysin D 0.32 BPHYT_RS18885 flagellar basal body rod modification protein FlgD low > 109
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0560 RND family efflux transporter, MFP subunit 0.26 Ga0059261_2091 Flagellar hook capping protein low > 68

Not shown: 4 genomes with orthologs for HSERO_RS06810 only; 29 genomes with orthologs for HSERO_RS10190 only