Conservation of cofitness between HSERO_RS08590 and HSERO_RS08365 in Herbaspirillum seropedicae SmR1

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08590 pseudouridine synthase 1.0 HSERO_RS08365 AraC family transcriptional regulator 0.35 4
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS15880 pseudouridine synthase 0.46 RR42_RS29270 AraC family transcriptional regulator low > 128
Acinetobacter radioresistens SK82 0.44 MPMX26_01203 Ribosomal small subunit pseudouridine synthase A 0.30 MPMX26_03085 HTH-type transcriptional regulator NimR — —
Variovorax sp. SCN45 0.42 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.49 GFF3729 Transcriptional regulator, AraC family low > 127
Shewanella sp. ANA-3 0.26 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) 0.23 Shewana3_1081 AraC family transcriptional regulator (RefSeq) low > 73
Rahnella sp. WP5 0.26 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.26 EX31_RS24135 AraC family transcriptional regulator low > 89
Pantoea sp. MT58 0.26 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA 0.33 IAI47_10240 helix-turn-helix transcriptional regulator low > 76
Serratia liquefaciens MT49 0.25 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.40 IAI46_22565 helix-turn-helix transcriptional regulator low > 86
Enterobacter sp. TBS_079 0.25 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A 0.31 MPMX20_03566 HTH-type transcriptional regulator NimR low > 85
Klebsiella michiganensis M5al 0.24 BWI76_RS19810 16S rRNA pseudouridine(516) synthase 0.39 BWI76_RS05880 AraC-type DNA-binding domain-containing protein — —
Enterobacter asburiae PDN3 0.24 EX28DRAFT_0378 pseudouridine synthase 0.33 EX28DRAFT_2771 AraC-type DNA-binding domain-containing proteins low > 76
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase 0.36 ABZR86_RS07475 helix-turn-helix transcriptional regulator low > 74
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.46 Pf1N1B4_3420 Transcriptional regulator, AraC family low > 87
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_17535 16S rRNA pseudouridine(516) synthase 0.34 AO353_05765 AraC family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_04690 16S rRNA pseudouridine(516) synthase 0.45 AO356_18610 AraC family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.48 Pf6N2E2_5650 Transcriptional regulator, AraC family low > 103
Pseudomonas sp. RS175 0.19 PFR28_00665 Ribosomal small subunit pseudouridine synthase A 0.44 PFR28_03295 HTH-type transcriptional regulator NimR low > 88
Pseudomonas simiae WCS417 0.17 PS417_07010 pseudouridine synthase 0.32 PS417_11450 AraC family transcriptional regulator low > 88

Not shown: 54 genomes with orthologs for HSERO_RS08590 only; 7 genomes with orthologs for HSERO_RS08365 only