Conservation of cofitness between HSERO_RS10860 and HSERO_RS07265 in Herbaspirillum seropedicae SmR1

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS10860 RNA pseudouridylate synthase 1.0 HSERO_RS07265 aspartyl/asparaginyl beta-hydroxylase AspH 0.28 18
Variovorax sp. OAS795 0.65 ABID97_RS00980 pseudouridine synthase 0.60 ABID97_RS22370 lipid A hydroxylase LpxO low > 91
Variovorax sp. SCN45 0.64 GFF3530 Pseudouridine synthase 0.60 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO low > 127
Lysobacter sp. OAE881 0.39 ABIE51_RS13020 rRNA pseudouridine synthase 0.56 ABIE51_RS04615 lipid A hydroxylase LpxO low > 62
Rhodanobacter denitrificans MT42 0.38 LRK55_RS15640 rRNA pseudouridine synthase 0.50 LRK55_RS14780 aspartyl/asparaginyl beta-hydroxylase domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15885 rRNA pseudouridine synthase 0.50 LRK54_RS15065 aspartyl/asparaginyl beta-hydroxylase domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_04535 rsuA RNA-binding protein 0.50 OKGIIK_03825 Aspartyl beta-hydroxylase low > 52
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4655 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.54 PfGW456L13_3025 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO low > 87
Pseudomonas sp. RS175 0.36 PFR28_00484 Dual-specificity RNA pseudouridine synthase RluF 0.53 PFR28_01700 hypothetical protein low > 88
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1469.1 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.59 Xcc-8004.497.1 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO low > 74
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_05610 RNA-binding protein 0.54 AO356_27735 aspartyl beta-hydroxylase low > 104
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3158 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.50 Pf1N1B4_4750 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO 0.50 4
Pseudomonas simiae WCS417 0.35 PS417_05870 RNA-binding protein S4 0.54 PS417_13120 aspartyl beta-hydroxylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS05940 RNA-binding protein S4 0.54 PFLU_RS14180 lipid A hydroxylase LpxO low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS05940 RNA-binding protein S4 0.54 PFLU_RS14180 lipid A hydroxylase LpxO low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_1390 RNA-binding S4 0.51 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_1390 RNA-binding S4 0.51 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_16865 RNA-binding protein 0.55 AO353_25990 aspartyl beta-hydroxylase low > 101
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS18320 rRNA pseudouridine synthase 0.49 ABZR86_RS00755 aspartyl/asparaginyl beta-hydroxylase domain-containing protein low > 74
Pseudomonas putida KT2440 0.30 PP_1191 S4 domain protein 0.55 PP_2423 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase low > 96
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_2980 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.52 Pf6N2E2_796 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO low > 103

Not shown: 11 genomes with orthologs for HSERO_RS10860 only; 11 genomes with orthologs for HSERO_RS07265 only