Conservation of cofitness between HSERO_RS02150 and HSERO_RS05460 in Herbaspirillum seropedicae SmR1

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS02150 MFS transporter 1.0 HSERO_RS05460 LacI family transcription regulator 0.27 17
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS03860 MFS transporter 0.53 BPHYT_RS00410 LacI family transcription regulator low > 109
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3578 Major facilitator superfamily 0.37 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3578 Major facilitator superfamily 0.37 Psyr_3336 transcriptional regulator, LacI family low > 86
Pseudomonas putida KT2440 0.50 PP_4492 carbohydrate efflux transporter 0.40 PP_3415 Transcriptional regulator, LacI family low > 96
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4398 Xanthine transporter,putative 0.38 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3561 Xanthine transporter,putative 0.38 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_18565 MFS transporter 0.38 AO353_03255 LacI family transcriptional regulator low > 101
Rahnella sp. WP5 0.47 EX31_RS13530 MFS transporter 0.32 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Pseudomonas sp. RS175 0.47 PFR28_03309 putative MFS-type transporter YhhS 0.39 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS23850 MFS transporter 0.38 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS23850 MFS transporter 0.38 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pantoea sp. MT58 0.47 IAI47_13425 MFS transporter 0.32 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Pseudomonas simiae WCS417 0.46 PS417_13095 MFS transporter 0.38 PS417_21990 LacI family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5635 Xanthine transporter,putative 0.38 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_18540 MFS transporter 0.39 AO356_05065 LacI family transcriptional regulator low > 104
Erwinia tracheiphila SCR3 0.44 LU632_RS09225 MFS transporter 0.32 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00230 putative MFS-type transporter YhhS 0.30 OHPLBJKB_00264 HTH-type transcriptional regulator GntR 0.41 9
Escherichia fergusonii Becca 0.43 EFB2_00343 putative MFS-type transporter YhhS 0.30 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli ECOR38 0.43 HEPCGN_15485 yhhS Uncharacterized MFS-type transporter YhhS 0.30 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli BL21 0.43 ECD_03322 putative arabinose efflux transporter 0.30 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli BW25113 0.43 b3473 yhhS putative transport (VIMSS) 0.30 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli Nissle 1917 0.43 ECOLIN_RS19855 MFS transporter 0.30 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR — —
Escherichia coli ECOR27 0.43 NOLOHH_08460 yhhS Uncharacterized MFS-type transporter YhhS 0.30 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC98 0.43 JDDGAC_20285 yhhS Uncharacterized MFS-type transporter YhhS 0.30 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 86
Escherichia coli ECRC99 0.43 KEDOAH_11485 yhhS Uncharacterized MFS-type transporter YhhS 0.30 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC101 0.43 MCAODC_07185 yhhS Uncharacterized MFS-type transporter YhhS 0.30 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC100 0.43 OKFHMN_16655 yhhS Uncharacterized MFS-type transporter YhhS 0.30 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 80
Enterobacter sp. TBS_079 0.43 MPMX20_04353 putative MFS-type transporter YhhS 0.30 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Escherichia coli ECRC62 0.43 BNILDI_03055 yhhS Uncharacterized MFS-type transporter YhhS 0.30 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC102 0.43 NIAGMN_14425 yhhS Uncharacterized MFS-type transporter YhhS 0.30 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR — —
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4109 Arabinose efflux permease 0.30 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Dickeya dianthicola 67-19 0.42 HGI48_RS20795 MFS transporter 0.33 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Dickeya dianthicola ME23 0.42 DZA65_RS21805 MFS transporter 0.33 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS00595 MFS transporter 0.33 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74

Not shown: 7 genomes with orthologs for HSERO_RS02150 only; 15 genomes with orthologs for HSERO_RS05460 only