Conservation of cofitness between HSERO_RS22470 and HSERO_RS05215 in Herbaspirillum seropedicae SmR1

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22470 D-xylose ABC transporter permease 1.0 HSERO_RS05215 LysR family transcriptional regulator 0.77 6
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_1457 Xylose ABC transporter, permease protein XylH 0.29 Pf6N2E2_1106 Chromosome initiation inhibitor low > 103
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS25860 sugar ABC transporter permease 0.52 QEN71_RS31025 LysR family transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_03879 xylose ABC transporter membrane protein 0.54 H281DRAFT_02334 DNA-binding transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_004932 D-xylose transport system permease protein 0.54 ABIE53_000319 DNA-binding transcriptional LysR family regulator low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS32810 xylose ABC transporter permease 0.54 BPHYT_RS19705 LysR family transcriptional regulator low > 109
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS18230 sugar ABC transporter permease 0.51 ABZR87_RS01515 LysR family transcriptional regulator low > 80
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS14410 sugar ABC transporter permease 0.51 ABZR86_RS04085 LysR family transcriptional regulator low > 74
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS23495 sugar ABC transporter permease 0.19 RALBFv3_RS00565 pca operon transcription factor PcaQ — —
Ralstonia solanacearum UW163 0.51 UW163_RS16745 sugar ABC transporter permease 0.19 UW163_RS13895 pca operon transcription factor PcaQ — —
Serratia liquefaciens MT49 0.51 IAI46_00295 sugar ABC transporter permease 0.23 IAI46_05785 LysR family transcriptional regulator low > 86
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3833 ABC-type xylose transport system, permease component 0.23 EX28DRAFT_1254 Transcriptional regulator 0.51 46
Pantoea sp. MT58 0.48 IAI47_00180 sugar ABC transporter permease 0.20 IAI47_09590 LysR family transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_00162 Xylose transport system permease protein XylH 0.24 MPMX20_02212 HTH-type transcriptional regulator GbpR low > 85
Klebsiella michiganensis M5al 0.47 BWI76_RS27040 xylose ABC transporter permease 0.22 BWI76_RS13280 LysR family transcriptional regulator low > 92
Escherichia coli ECOR38 0.46 HEPCGN_14825 xylH xylose ABC transporter permease XylH 0.21 HEPCGN_26160 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 87
Escherichia coli Nissle 1917 0.46 ECOLIN_RS20405 xylose ABC transporter permease XylH 0.21 ECOLIN_RS08220 LysR substrate-binding domain-containing protein low > 55
Escherichia fergusonii Becca 0.46 EFB2_00239 Xylose transport system permease protein XylH 0.21 EFB2_02558 HTH-type transcriptional regulator CatM low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00136 Xylose transport system permease protein XylH 0.21 OHPLBJKB_02293 HTH-type transcriptional regulator CatM low > 73
Escherichia coli BL21 0.46 ECD_03420 D-xylose ABC transporter permease 0.21 ECD_01379 putative DNA-binding transcriptional regulator low > 61
Escherichia coli BW25113 0.46 b3568 xylH D-xylose transporter subunit (NCBI) 0.21 b1422 ydcI putative transcriptional regulator LYSR-type (VIMSS) low > 76
Escherichia coli ECOR27 0.46 NOLOHH_07885 xylH xylose ABC transporter permease XylH 0.21 NOLOHH_19335 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 75

Not shown: 20 genomes with orthologs for HSERO_RS22470 only; 17 genomes with orthologs for HSERO_RS05215 only