Conservation of cofitness between HSERO_RS22465 and HSERO_RS05215 in Herbaspirillum seropedicae SmR1

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22465 sugar ABC transporter 1.0 HSERO_RS05215 LysR family transcriptional regulator 0.87 4
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_1456 D-xylose transport ATP-binding protein XylG 0.29 Pf6N2E2_1106 Chromosome initiation inhibitor low > 103
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_03878 xylose ABC transporter ATP-binding protein 0.54 H281DRAFT_02334 DNA-binding transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_004931 D-xylose transport system ATP-binding protein 0.54 ABIE53_000319 DNA-binding transcriptional LysR family regulator low > 113
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS18225 D-xylose ABC transporter ATP-binding protein 0.51 ABZR87_RS01515 LysR family transcriptional regulator low > 80
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS32815 sugar ABC transporter 0.54 BPHYT_RS19705 LysR family transcriptional regulator low > 109
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS23500 xylose ABC transporter ATP-binding protein 0.19 RALBFv3_RS00565 pca operon transcription factor PcaQ low > 76
Ralstonia solanacearum UW163 0.71 UW163_RS16750 xylose ABC transporter ATP-binding protein 0.19 UW163_RS13895 pca operon transcription factor PcaQ — —
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS25865 D-xylose ABC transporter ATP-binding protein 0.52 QEN71_RS31025 LysR family transcriptional regulator low > 153
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS14415 D-xylose ABC transporter ATP-binding protein 0.51 ABZR86_RS04085 LysR family transcriptional regulator low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00137 Xylose import ATP-binding protein XylG 0.21 OHPLBJKB_02293 HTH-type transcriptional regulator CatM low > 73
Escherichia coli ECOR38 0.53 HEPCGN_14830 xylG D-xylose ABC transporter ATP-binding protein 0.21 HEPCGN_26160 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 87
Escherichia coli BW25113 0.53 b3567 xylG fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.21 b1422 ydcI putative transcriptional regulator LYSR-type (VIMSS) low > 76
Escherichia coli ECOR27 0.53 NOLOHH_07890 xylG D-xylose ABC transporter ATP-binding protein 0.21 NOLOHH_19335 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 75
Escherichia coli Nissle 1917 0.53 ECOLIN_RS20400 D-xylose ABC transporter ATP-binding protein 0.21 ECOLIN_RS08220 LysR substrate-binding domain-containing protein low > 55
Escherichia fergusonii Becca 0.53 EFB2_00240 Xylose import ATP-binding protein XylG 0.21 EFB2_02558 HTH-type transcriptional regulator CatM low > 86
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3832 D-xylose ABC transporter, ATP-binding protein 0.23 EX28DRAFT_1254 Transcriptional regulator 0.43 71
Klebsiella michiganensis M5al 0.53 BWI76_RS27035 xylose ABC transporter ATP-binding protein 0.22 BWI76_RS13280 LysR family transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.53 MPMX20_00163 Xylose import ATP-binding protein XylG 0.24 MPMX20_02212 HTH-type transcriptional regulator GbpR low > 85
Pantoea sp. MT58 0.52 IAI47_00185 xylose ABC transporter ATP-binding protein 0.20 IAI47_09590 LysR family transcriptional regulator low > 76
Serratia liquefaciens MT49 0.51 IAI46_00290 xylose ABC transporter ATP-binding protein 0.23 IAI46_05785 LysR family transcriptional regulator low > 86

Not shown: 20 genomes with orthologs for HSERO_RS22465 only; 18 genomes with orthologs for HSERO_RS05215 only