Conservation of cofitness between HSERO_RS09060 and HSERO_RS03540 in Herbaspirillum seropedicae SmR1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09060 histone acetyltransferase HPA2 protein 1.0 HSERO_RS03540 dimethyladenosine transferase 0.30 18
Ralstonia solanacearum GMI1000 0.33 RS_RS24915 N-acetyltransferase 0.55 RS_RS02580 ribosomal RNA small subunit methyltransferase A low > 80
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1337.1 FIG001353: Acetyltransferase 0.38 Xcc-8004.4271.1 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4769 FIG001353: Acetyltransferase 0.48 GFF190 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) low > 78
Dickeya dadantii 3937 0.29 DDA3937_RS02060 GNAT family N-acetyltransferase 0.45 DDA3937_RS18265 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS02165 GNAT family N-acetyltransferase 0.45 DZA65_RS19340 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Dickeya dianthicola 67-19 0.29 HGI48_RS04715 GNAT family N-acetyltransferase 0.45 HGI48_RS18200 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Rhizobium sp. OAE497 0.29 ABIE40_RS29680 GNAT family N-acetyltransferase 0.30 ABIE40_RS06390 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 107
Pectobacterium carotovorum WPP14 0.29 HER17_RS16735 GNAT family N-acetyltransferase 0.45 HER17_RS02960 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 75
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_16640 N-acetyltransferase 0.48 CSW01_02325 ribosomal RNA small subunit methyltransferase A — —
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS07800 GNAT family N-acetyltransferase 0.40 ABZR86_RS11270 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Sinorhizobium meliloti 1021 0.28 SMc00739 hypothetical protein 0.30 SMc00579 dimethyladenosine transferase low > 103
Escherichia coli ECRC100 0.27 OKFHMN_16960 GNAT family N-acetyltransferase 0.48 OKFHMN_10835 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC102 0.27 NIAGMN_14730 GNAT family N-acetyltransferase 0.48 NIAGMN_08685 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC98 0.27 JDDGAC_20590 GNAT family N-acetyltransferase 0.48 JDDGAC_14430 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 86
Shewanella oneidensis MR-1 0.27 SO0636 acetyltransferase, GNAT family (NCBI ptt file) 0.52 SO3639 ksgA dimethyladenosine transferase (NCBI ptt file) low > 76
Escherichia coli ECRC99 0.27 KEDOAH_11180 GNAT family N-acetyltransferase 0.48 KEDOAH_17320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC101 0.27 MCAODC_07490 GNAT family N-acetyltransferase 0.48 MCAODC_01350 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 87
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_2144 GCN5-related N-acetyltransferase (RefSeq) 0.27 DvMF_0501 ksgA dimethyladenosine transferase (RefSeq) low > 51
Escherichia coli ECOR27 0.26 NOLOHH_24650 GNAT family N-acetyltransferase 0.49 NOLOHH_03180 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Mycobacterium tuberculosis H37Rv 0.26 Rv0919 GCN5-related N-acetyltransferase 0.25 Rv1010 Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase) low > 58
Escherichia coli ECOR38 0.24 HEPCGN_23850 GNAT family N-acetyltransferase 0.48 HEPCGN_08825 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 87
Bosea sp. OAE506 0.22 ABIE41_RS02760 GNAT family N-acetyltransferase 0.32 ABIE41_RS17730 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 77
Rhodopseudomonas palustris CGA009 0.22 TX73_021425 GNAT family N-acetyltransferase 0.31 TX73_015860 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 86
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_20485 hypothetical protein 0.46 AO356_14335 rRNA methyltransferase low > 104
Escherichia coli ECRC62 0.22 BNILDI_02980 rimI N-acetyltransferase 0.48 BNILDI_08425 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 75
Bifidobacterium breve UCC2003 0.17 BBR_RS19525 N-acetyltransferase 0.27 BBR_RS20420 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 34

Not shown: 0 genomes with orthologs for HSERO_RS09060 only; 76 genomes with orthologs for HSERO_RS03540 only